LOCUS BC028050 2505 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CREB regulated transcription coactivator 1, mRNA (cDNA
clone MGC:39876 IMAGE:4938995), complete cds.
ACCESSION BC028050
VERSION BC028050.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2505)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2505)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: c Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34732708.
FEATURES Location/Qualifiers
source 1..2505
/db_xref="H-InvDB:HIT000040417"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39876 IMAGE:4938995"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2505
/gene="CRTC1"
/gene_synonym="FLJ14027"
/gene_synonym="KIAA0616"
/gene_synonym="TORC1"
/gene_synonym="WAMTP1"
/db_xref="GeneID:23373"
/db_xref="HGNC:HGNC:16062"
/db_xref="MIM:607536"
CDS 21..1925
/gene="CRTC1"
/gene_synonym="FLJ14027"
/gene_synonym="KIAA0616"
/gene_synonym="TORC1"
/gene_synonym="WAMTP1"
/codon_start=1
/product="CREB regulated transcription coactivator 1"
/protein_id="AAH28050.1"
/db_xref="GeneID:23373"
/db_xref="HGNC:HGNC:16062"
/db_xref="MIM:607536"
/translation="MATSNNPRKFSEKIALHNQKQAEETAAFEEVMKDLSLTRAARLQ
LQKSQYLQLGPSRGQYYGGSLPNVNQIGSGTMDLPFQTPFQSSGLDTSRTTRHHGLVD
RVYRERGRLGSPHRRPLSVDKHGRQADSCPYGTMYLSPPADTSWRRTNSDSALHQSTM
TPTQPESFSSGSQDVHQKRVLLLTVPGMEETTSEADKNLSKQAWDTKKTGSRPKSCEV
PGINIFPSADQENTTALIPATHNTGGSLPDLTNIHFPSPLPTPLDPEEPTFPALSSSS
STGNLAANLTHLGIGGAGQGMSTPGSSPQHRPAGVSPLSLSTEARRQQASPALSPLSP
ITQAVAMDALSLEQQLPYAFFTQAGSQQPPPQPQPPPPPPPASQQPPPPPPPQAPVRL
PPGGPLLPSASLTRGPQPPPLAVTVPSSLPQSPPENPGQPSMGIDIASAPALQQYRTS
AGSPANQSPTSPVSNQGFSPGSSPQHTSTLGSVFGDAYYEQQMAARQANALSHQLEQF
NMMENAISSSSLYSPGSTLNYSQAAMMGLTGSHGSLPDSQQLGYASHSGIPNIILTVT
GESPPSLSKELTSSLAGVGDVSFDSDSQFPLDELKIDPLTLDGLHMLNDPDMVLADPA
TEDTFRMDRL"
BASE COUNT 488 a 985 c 685 g 347 t
ORIGIN
1 ccacgcgtcc gggcgagaag atggcgactt cgaacaatcc gcggaaattc agcgagaaga
61 tcgcgctgca caatcagaag caggcggagg agacggcggc cttcgaggag gtcatgaagg
121 acctgagcct gacgcgggcc gcgcggctcc agctccagaa atcccagtac ctgcaactgg
181 gccccagccg aggccagtac tatggcgggt ccctgcccaa cgtgaaccag atcgggagtg
241 gcaccatgga cctgcccttc cagaccccct tccaatcctc gggcctggac accagccgga
301 ccacccggca ccatgggctg gtggacaggg tgtaccggga gcgtggccgg ctcggctccc
361 cacaccgccg gcccctgtca gtggacaaac acggacggca ggccgacagc tgcccctatg
421 gcaccatgta cctctcacca cccgcggaca ccagctggag aaggaccaat tctgactccg
481 ccctgcacca gagcacaatg acgcccacgc agccagaatc ctttagcagt gggtcccagg
541 acgtgcacca gaaaagagtc ttactgttaa cagtcccagg aatggaagag accacatcag
601 aggcagacaa aaacctttcc aagcaagcat gggacaccaa gaagacgggg tccaggccca
661 agtcctgtga ggtccccgga atcaacatct tcccgtctgc cgaccaggaa aacactacag
721 ccctgatccc cgccacccac aacacagggg ggtccctgcc cgacctgacc aacatccact
781 tcccctcccc gctcccgacc ccgctggacc ccgaggagcc caccttccct gcactgagca
841 gctccagcag caccggcaac ctcgcggcca acctgacgca cctgggcatc ggtggcgccg
901 gccagggaat gagcacacct ggctcctctc cacagcaccg cccagctggc gtcagccccc
961 tgtccctgag cacagaggca aggcgtcagc aggcatcgcc cgccctgtcc ccgctgtcac
1021 ccatcactca ggctgtagcc atggacgccc tgtctctgga gcagcagctg ccctacgcct
1081 tcttcaccca ggcgggctcc cagcagccac cgccgcagcc ccagcccccg ccgcctcctc
1141 cacccgcgtc ccagcagcca ccacccccgc cacccccaca ggcgcccgtc cgcctgcccc
1201 ctggtggccc cctgttgccc agcgccagcc tgactcgtgg gccacagccg cccccgcttg
1261 cagtcacggt accgtcctct ctcccccagt cccccccaga gaaccctggc cagccatcga
1321 tggggatcga catcgcctcg gcgccggctc tgcagcagta ccgcactagc gccggctccc
1381 cggccaacca gtctcccacc tcgccagtct ccaatcaagg cttctcccca gggagctccc
1441 cgcaacacac ttccaccctg ggcagcgtgt ttggggacgc gtactatgag cagcagatgg
1501 cggccaggca ggccaatgct ctgtcccacc agctggagca gttcaacatg atggagaacg
1561 ccatcagctc cagcagcctg tacagcccgg gctccacact caactactcg caggcggcca
1621 tgatgggcct cacgggcagc cacgggagcc tgccggactc gcagcaactg ggatacgcca
1681 gccacagtgg catccccaac atcatcctca cagtgacagg agagtccccc cccagcctct
1741 ctaaagaact gaccagctct ctggccgggg tcggcgacgt cagcttcgac tccgacagcc
1801 agtttcccct ggacgaactc aagatcgacc ccctgaccct cgacggactg cacatgctca
1861 acgaccccga catggttctg gccgacccag ccaccgagga caccttccgg atggaccgcc
1921 tgtgagcggg cacgccggca ccctgccgct cagccgtccc gacggcgcct ccccagcccg
1981 gggacggccg tgctccgtcc ctcgccaacg gccgagcttg tgattctgag cttgcaatgc
2041 cgccaagcgc cccccgccag cccgcccccg gttgtccacc tcccgcgaag cccaatcgcg
2101 aggccgcgag ccgggccgtc cacccacccg cccgcccagg gctgggctgg gatcggaggc
2161 cgtgagcctc ccgcccctgc agaccctccc tgcactggct ccctcgcccc cagccccggg
2221 gcctgagccg tcccctgtaa gatgcgggaa gtgtcagctc ccggcgtggc gggcaggctc
2281 aggggagggg cgcgcatggt ccgccagggc tgtgggccgt ggcgcatttt ccgactgttt
2341 gtccagctct cactgccttc cttggttccc ggtcccccag cccatccgcc atccccagcc
2401 cgtggtcagg tagagagtga gccccacgcc gccccaggga ggaggcgcca gagcgcgggg
2461 cagacgcaaa gtgaaataaa cactattttg aaaaaaaaaa aaaaa
//