LOCUS BC028040 2725 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens 2',3'-cyclic nucleotide 3' phosphodiesterase, mRNA
(cDNA clone MGC:40095 IMAGE:5248370), complete cds.
ACCESSION BC028040
VERSION BC028040.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2725)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2725)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein.
FEATURES Location/Qualifiers
source 1..2725
/db_xref="H-InvDB:HIT000040414"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40095 IMAGE:5248370"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2725
/gene="CNP"
/gene_synonym="CNP1"
/db_xref="GeneID:1267"
/db_xref="HGNC:HGNC:2158"
/db_xref="MIM:123830"
CDS 106..1371
/gene="CNP"
/gene_synonym="CNP1"
/codon_start=1
/product="2',3'-cyclic nucleotide 3' phosphodiesterase"
/protein_id="AAH28040.1"
/db_xref="GeneID:1267"
/db_xref="HGNC:HGNC:2158"
/db_xref="MIM:123830"
/translation="MNRGFSRKSHTFLPKIFFRKMSSSGAKDKPELQFPFLQDEDTVA
TLLECKTLFILRGLPGSGKSTLARVIVDKYRDGTKMVSADAYKITPGARGAFSEEYKR
LDEDLAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVEPKTAWRLDCAQ
LKEKNQWQLSADDLKKLKPGLEKDFLPLYFGWFLTKKSSETLRKAGQVFLEELGNHKA
FKKELRQFVPGDEPREKMDLVTYFGKRPPGVLHCTTKFCDYGKAPGAEEYAQQDVLKK
SYSKAFTLTISALFVTPKTTGARVELSEQQLQLWPSDVDKLSPTDNLPRGSRAHITLG
CAADVEAVQTGLDLLEILRQEKGGSRGEEVGELSRGKLYSLGNGRWMLTLAKNMEVRA
IFTGYYGKGKPVPTQGSRKGGALQSCTII"
BASE COUNT 670 a 747 c 763 g 545 t
ORIGIN
1 ggctcgggtt gtgccaccgc tggactcccg tgtccctccg cgcaggcggg cggccccgga
61 gcgctggtgc cggcagaggc ggcgacggtg gcgcccctcc tcatcatgaa cagaggcttc
121 tcccgaaaaa gccacacatt cctgcccaag atcttcttcc gcaagatgtc atcctcaggg
181 gccaaggaca agcctgagct gcagtttccc ttccttcagg atgaggacac agtggccacg
241 ctgctagagt gcaagacgct cttcatcttg cgcggcctgc caggaagcgg caagtccacg
301 ctggcacggg tcatcgtgga caagtaccgt gatggcacca agatggtgtc ggctgacgct
361 tacaagatca cccccggcgc tcgaggagcc ttctccgagg agtacaagcg gctcgatgag
421 gacctggctg cctactgccg ccgccgggac atcagaattc ttgtgcttga tgacaccaac
481 cacgaacggg aacggctgga gcagctcttt gaaatggccg accagtacca gtaccaggtg
541 gtgctggtgg agcccaagac ggcgtggcgg ctggactgtg cccagctcaa ggagaagaac
601 cagtggcagc tgtcggctga tgacctgaag aagctgaagc ctgggctgga gaaggacttc
661 ctgccgctct acttcggctg gttcctgacc aagaagagct ctgagaccct ccgcaaagcc
721 ggccaggtct tcctggaaga gctggggaac cacaaggcct tcaagaagga gctgcgacaa
781 ttcgtccctg gggatgagcc cagggagaag atggacttgg tcacctactt tggaaagaga
841 cccccaggcg tgctgcattg cacaaccaag ttttgtgact acgggaaggc tcccggggca
901 gaggagtacg ctcaacaaga tgtgttaaag aaatcttact ccaaggcctt cacgctgacc
961 atctctgccc tctttgtgac acccaagacg actggggccc gggtggagtt aagcgagcag
1021 caactgcagt tgtggccgag tgatgtggac aagctgtcac ccactgacaa cctgccgcgg
1081 gggagccgcg cccacatcac cctcggctgt gcagctgacg tagaggccgt gcagacgggc
1141 cttgacctct tagagattct gcggcaggag aaggggggca gccgaggcga ggaggtgggc
1201 gagctaagcc ggggcaagct ctattccttg ggcaatgggc gctggatgct gaccctggcc
1261 aagaacatgg aggtcagggc catcttcacg gggtactacg ggaaaggcaa acctgtgccc
1321 acgcaaggta gccggaaggg gggcgccttg cagtcctgca ccatcatatg agtgttctca
1381 ccaccactta tgcccctaga agggaagggg agagggaaac gtgccctctg tttgatcctt
1441 gttttgtgac attttttttt tttttttttt actcaaagtt aacctacctg taacctttta
1501 aaaacttgta aaataactga ccctcccttc ctgtccgccc tcttcccctc taatgctcac
1561 gctcccaaca caaggtgggc agggaggcac cattcaggaa cctggaccaa agctgacgag
1621 gctgggccaa gccagggatg gggccacagc cagaaccccg agccctactt ccaggttctg
1681 gttagctcag ccccagccca gcccagctgc tctgcccaga gctgggtgag tggggagaca
1741 cctcagagcc ccgcaaaacc cactgaccgg aggcaaaagg cagtggggct gggggtagtt
1801 ttccatggtc acagagaact agtggtggct ctgagaaggg gaggacctct gggctttgat
1861 tccatctcct tgtctttttt ctttgttttt agagacaggg tcctgctatt tcccaagctg
1921 gagtgcagtg gtgcgatcat ggctcactgc agcctcgaac tcctgggctc aagcaatcct
1981 cctgagtgat cccatttctt aatcagtgta gccccaagaa ggctggggct atttaccagg
2041 gtagaaaaag gagcttacct cccacctttg gtcctaagtc cctgccccct ccccttcaca
2101 ccataactag gtaacagttt gataactagg gaagaaagca gaacagttaa gcagccgcca
2161 catccccgct ggctgggggc ctcactccag gaaggggctg gactggctgt cctttccagt
2221 ggcctggctc cgctgtgtgg atggggagat cggggccaga ggcagaaccc tggtgaggaa
2281 gctccagtcc tgctctctac ccagcccatc ttgcctccat ggtgcctctg gaggcctctg
2341 ggcctcctct aacaggggct ggtgggcacc aagagccaat ggagtagacc cctggctggt
2401 aagggccaag tcccaccggt tgcttctggg aaggggtttc taacactagt ctgtgtgctg
2461 tggttcctgg ggtgccctcc actgccctct gttcagtaac agggccttgc taatcgggtt
2521 gtcactcaac aaaagtgctt tggatttaag ttactatcct ggctttgccc aacctcagca
2581 acctgtaaga ctgataatga aataaatcat gttaatccta aaaaaaaaaa aaaaaaaaaa
2641 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaaa aaaaa
//