LOCUS BC028036 3618 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 5, member B, mRNA
(cDNA clone MGC:40127 IMAGE:5242899), complete cds.
ACCESSION BC028036
VERSION BC028036.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3618)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3618)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23943865.
FEATURES Location/Qualifiers
source 1..3618
/db_xref="H-InvDB:HIT000040412"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40127 IMAGE:5242899"
/tissue_type="Brain, fetal, whole pooled"
/clone_lib="NIH_MGC_121"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3618
/gene="FAM5B"
/gene_synonym="BRINP2"
/gene_synonym="DBCCR1L2"
/gene_synonym="KIAA1747"
/gene_synonym="RP5-1026E2.1"
/db_xref="GeneID:57795"
/db_xref="HGNC:HGNC:13746"
CDS 314..2665
/gene="FAM5B"
/gene_synonym="BRINP2"
/gene_synonym="DBCCR1L2"
/gene_synonym="KIAA1747"
/gene_synonym="RP5-1026E2.1"
/codon_start=1
/product="family with sequence similarity 5, member B"
/protein_id="AAH28036.1"
/db_xref="GeneID:57795"
/db_xref="HGNC:HGNC:13746"
/translation="MRWQCGTRFRGLRPAVAPWTALLALGLPGWVLAVSATAAAVVPE
QHASVAGQHPLDWLLTDRGPFHRAQEYADFMERYRQGFTTRYRIYREFARWKVNNLAL
ERKDFFSLPLPLAPEFIRNIRLLGRRPNLQQVTENLIKKYGTHFLLSATLGGEESLTI
FVDKQKLGRKTETTGGASIIGGSGNSTAVSLETLHQLAASYFIDRESTLRRLHHIQIA
TGAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKVQLLGLQVLLPEYLRERFVAAA
LSYITCSSEGELVCKENDCWCKCSPTFPECNCPDADIQAMEDSLLQIQDSWATHNRQF
EESEEFQALLKRLPDDRFLNSTAISQFWAMDTSLQHRYQQLGAGLKVLFKKTHRILRR
LFNLCKRCHRQPRFRLPKERSLSYWWNRIQSLLYCGESTFPGTFLEQSHSCTCPYDQS
SCQGPIPCALGEGPACAHCAPDNSTRCGSCNPGYVLAQGLCRPEVAESLENFLGLETD
LQDLELKYLLQKQDSRIEVHSIFISNDMRLGSWFDPSWRKRMLLTLKSNKYKPGLVHV
MLALSLQICLTKNSTLEPVMAIYVNPFGGSHSESWFMPVNEGSFPDWERTNVDAAAQC
QNWTITLGNRWKTFFETVHVYLRSRIKSLDDSSNETIYYEPLEMTDPSKNLGYMKINT
LQVFGYSLPFDPDAIRDLILQLDYPYTQGSQDSALLQLIELRDRVNQLSPPGKVRLDL
FSCLLRHRLKLANNEVGRIQSSLRAFNSKLPNPVEYETGKLCS"
BASE COUNT 933 a 972 c 926 g 787 t
ORIGIN
1 gagcggggag caagagaatt tgaaaagaga catccgctcc ctctcacacg ctgaggggga
61 ggcattcgcg tttccccaaa tgagaaagaa ccacaagaaa tcatgaagta aaaactttgg
121 aaagctgcca ctggagatgt tgcacaaaaa cctggaatct tttaggagtc tcctcccagt
181 cgttgaaggt ttggggagca gctgatacag caaggagggc tcttgcaagg attcaagctc
241 cgagccctgg aggagcagca cggagcggga gagcgtggcg agagaatgaa gaaaccaatc
301 gcccgggaga agcatgaggt ggcagtgtgg cactcggttt agagggcttc ggccggcggt
361 ggccccatgg acagccctgc tggcactggg cctgcctggc tgggtgttgg ctgtctcagc
421 cacggcggct gctgtggtcc ccgagcagca tgcctccgta gctggccagc atcccctgga
481 ctggctgctc acagaccggg gccccttcca ccgcgctcag gagtatgctg acttcatgga
541 gcggtaccgc cagggtttca ccaccaggta caggatttat agggagtttg cccgttggaa
601 ggtgaacaac ttggctctgg aaaggaagga cttcttcagt ttgccattgc ctcttgcccc
661 agagtttatc cggaacattc gcctccttgg aaggagaccc aatctgcaac aggttacaga
721 aaatctgatt aaaaagtacg gcactcattt cttactttct gccacccttg gaggagaaga
781 gtccctgacc atttttgtgg acaagcagaa actgggaaga aagacagaga caacaggagg
841 tgcctctata atcgggggca gtgggaacag cacagctgtg tccctggaga ccctgcacca
901 gctggccgcc tcctacttca tcgacagaga gagcacgctg cgacggctgc accatatcca
961 gatagccacg ggggccatca aggtcaccga gaccaggacc ggtcctctgg gctgcagcaa
1021 ctatgacaat ctggactcag tcagttctgt cttggtacag agtccagaga acaaagtaca
1081 gttacttggc cttcaggtgc tgctgcctga gtatctgcgt gagcgctttg tagctgcagc
1141 actcagctac atcacatgca gctctgaggg tgagctcgtc tgcaaggaga atgactgctg
1201 gtgcaagtgc agccccacct tccctgaatg caactgccct gatgctgaca tccaggccat
1261 ggaggacagc ctgctgcaga tccaggactc ctgggccact cacaaccggc agtttgaaga
1321 gtcagaagag ttccaggccc tgctgaaaag gctgcccgat gaccggttcc tgaactccac
1381 agctatctcc cagttctggg ccatggacac cagccttcag caccgctacc agcagctggg
1441 agctggcttg aaagtgctgt tcaaaaagac ccatcggatc ctacgccggc tcttcaacct
1501 ctgcaagcgc tgccatcgcc agcctcgctt ccgcctgccc aaggagaggt ccttgtccta
1561 ctggtggaac cgaatccagt ccctcctcta ctgtggggaa agcacctttc ctggcacttt
1621 cctggaacag agccacagct gcacctgccc ctatgaccaa tcttcctgcc agggccccat
1681 cccatgtgcc ttgggcgaag ggcccgcgtg tgcccactgt gctccagaca atagcacacg
1741 ctgtgggagc tgcaacccgg gctatgtgct ggcccagggg ctgtgccggc cagaggtggc
1801 cgagtccctg gaaaactttc ttgggctgga gacagacttg caggacctgg agctaaagta
1861 cctgctgcag aagcaggata gccgcattga ggtacactcc atcttcatca gcaatgacat
1921 gcggctgggc agctggtttg acccttcctg gaggaagcgc atgctgctca ccctgaagag
1981 caacaagtac aagcctgggc tggtgcacgt gatgttggcc ttgtccttgc agatctgtct
2041 caccaagaac agcaccctgg agcctgtcat ggccatctac gtcaacccct ttgggggcag
2101 ccactctgag agctggttca tgcctgtgaa tgagggcagc tttcctgact gggaaaggac
2161 taacgtggat gcagctgccc agtgccaaaa ctggactatc accttgggga ataggtggaa
2221 gactttcttt gagacagttc atgtttacct acggagccga atcaagtccc tggatgacag
2281 ctccaatgag acaatctact atgagcccct ggagatgact gatccctcta agaatttggg
2341 ttacatgaaa attaacacct tgcaggtctt tggctacagc ctgccctttg acccagatgc
2401 tatccgggac ttaattctcc agttggacta cccatatact caaggttccc aggactctgc
2461 actcttgcag ctcattgagc tcagggaccg ggtgaaccag ctttctccac ctggcaaagt
2521 ccgacttgac cttttctcct gcttgctccg gcatcggctt aagctggcca acaatgaggt
2581 gggcaggatc cagtcctccc tgagggcttt caattctaag ctgccaaacc ctgtggaata
2641 tgagaccggc aaactctgta gctaatgggc ggcccacttc agcactgggc aaggagggga
2701 tccatgaatc tggggtacaa agataatcta agccctcacc ttagtgccaa cagggtgtgc
2761 tcccacgaga ctttcagcat ccagtagatg ggacctcgag gctcgagctg aagcaggcga
2821 gagagaaaca gctactgcgt gcgtgcgcgc acgcatacac acacacacac acacactggc
2881 acagggaggc tacaactaag tagcctcaga tctgtaaagt tgattggtgc tttctaaaat
2941 gaatgcaatt gaaagaaagg agccaaggaa gagattaaga aaaagaacca gctgaaccat
3001 gaaacaaaca aaaatcctaa aagtgattct tgtcattcaa gaaagcaaga ggggacaaca
3061 atgggagggg tcggagctct tccttcccct ctgtggagtc acttttgtat tctttttaac
3121 cagatttctt aaaatgttgt tgttttgtga atcctgacat tggttcttac ttttgtatgc
3181 tgcctcctct gtgccctccc agacgctgac tgggaaacac aagaagtaca accaacagga
3241 accagcgcca agggcaggca gcggcctcct tgctcccctc ccttactcct ccctctgctg
3301 cctcctcccc ccaccaagtt tcagggccct ggattgttcc cagttcccat tgtggtccct
3361 tcagagctcc tttccaacag catctctctg tcgaagaaag aagctctgtc aagttagaga
3421 gagacaatgt gtaggaaatg ttctttttta aaaaaaaata acaaaaacaa aacaaaacta
3481 tttattttgt gattgttttc cttgttaatc tgctccaacc acctgaacat ctaagtaaac
3541 atttatctgg tttaatataa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3601 aaaaaaaaaa aaaaaaaa
//