LOCUS BC027982 2469 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens potassium inwardly-rectifying channel, subfamily J,
member 12, mRNA (cDNA clone MGC:40138 IMAGE:3873918), complete cds.
ACCESSION BC027982
VERSION BC027982.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2469)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2469)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 62 Row: a Column: 17.
FEATURES Location/Qualifiers
source 1..2469
/db_xref="H-InvDB:HIT000091429"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40138 IMAGE:3873918"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2469
/gene="KCNJ12"
/gene_synonym="hIRK"
/gene_synonym="hkir2.2x"
/gene_synonym="IRK2"
/gene_synonym="kcnj12x"
/gene_synonym="Kir2.2"
/gene_synonym="Kir2.2v"
/db_xref="GeneID:3768"
/db_xref="HGNC:HGNC:6258"
/db_xref="MIM:602323"
CDS 717..2018
/gene="KCNJ12"
/gene_synonym="hIRK"
/gene_synonym="hkir2.2x"
/gene_synonym="IRK2"
/gene_synonym="kcnj12x"
/gene_synonym="Kir2.2"
/gene_synonym="Kir2.2v"
/codon_start=1
/product="potassium inwardly-rectifying channel, subfamily
J, member 12"
/protein_id="AAH27982.1"
/db_xref="GeneID:3768"
/db_xref="HGNC:HGNC:6258"
/db_xref="MIM:602323"
/translation="MTAASRANPYSIVSSEEDGLHLVTMSGANGFGNGKVHTRRRCRN
RFVKKNGQCNIEFANMDEKSQRYLADMFTTCVDIRWRYMLLIFSLAFLASWLLFGIIF
WVIAVAHGDLEPAEGRGRTPCVMQVHGFMAAFLFSIETQTTIGYGLRCVTEECPVAVF
MVVAQSIVGCIIDSFMIGAIMAKMARPKKRAQTLLFSHNAVVALRDGKLCLMWRVGNL
RKSHIVEAHVRAQLIKPRVTEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEIDE
ASPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLANEILWGHRFEPVLFEE
KNQYKIDYSHFHKTYEVPSTPRCSAKDLVENKFLLPSANSFCYENELAFLSRDEEDEA
DGDQDGRSRDGLSPQARHDFDRLQAGGGVLEQRPYRRESEI"
BASE COUNT 449 a 787 c 823 g 410 t
ORIGIN
1 ccacgcgtcc gggcgcggag ctgggtgcgc gccgagcctc tgcctcccgc cgcctcctcg
61 ccctccattc ctcgctcccc gtcttctccc ggccacaccg ccactgctgc cgcctccctg
121 ggaacagtag ccgggggagg gggactggcg cggtcagagc ctgcgaggag gtgcggggcg
181 ccggggcgta ggggagcgcg ccgggccctg cccgagatca gataacagcc ggcgggggag
241 ggggtgggcc ggccgtgctc acagccggac cgagggaccg acgccagccg ccccggccca
301 agcgagcgcc cagcggccgg gggcgccgtc caggcgcgcg cccccgaccc gtggctggac
361 cagggcgatc cgctttgcag agaagacgcg cccctcggca tggagcgccc ccgggagctg
421 ccctgaggcg gtggcggcag cggcggcgat gcagccagcg cggcagctgc cggggccagg
481 aacggccgcc cggagctggg aggacgccga gcgcgccgcg cccgggccac tgaccgagga
541 tgttctagtg actggatcct ttccagttgg tgcctgggaa atggcagcca ctactaattc
601 agccttgaag acagtaccgt gcccactcag caccattaca tagaagatag aactcaagag
661 gagccgccct gcctggagct agcctggggg cgagccaggg tcccccaacc cccgggatga
721 ccgcggccag ccgggccaac ccctacagca tcgtgtcatc ggaggaggac gggctgcacc
781 tggtcaccat gtcgggcgcc aacggcttcg gcaacggcaa ggtgcacacg cggcgcaggt
841 gccgcaaccg cttcgtcaag aagaatggcc agtgcaacat tgagttcgcc aacatggacg
901 agaagtcaca gcgctacctg gctgacatgt tcaccacctg tgtggacatc cgctggcggt
961 acatgctgct catcttctcg ctggccttcc ttgcctcctg gctgctgttc ggcatcatct
1021 tctgggtcat cgcggtggca cacggtgacc tggagccggc tgagggccgg ggccgcacac
1081 cctgtgtgat gcaggtgcac ggcttcatgg cggccttcct cttctccatc gagacgcaga
1141 ccaccatcgg ctacgggctg cgctgtgtga cggaggagtg cccggtggcc gtcttcatgg
1201 tggtggccca gtccatcgtg ggctgcatca tcgactcctt catgattggt gccatcatgg
1261 ccaagatggc aaggcccaag aagcgggcac agacgctgct gttcagccac aacgccgtgg
1321 tggccctgcg tgacggcaag ctctgcctca tgtggcgtgt gggtaacctg cgcaagagcc
1381 acattgtgga ggcccatgtg cgcgcgcagc tcatcaagcc gcgggtcacc gaggagggcg
1441 agtacatccc gctggaccag atcgacatcg atgtgggctt cgacaagggc ctggaccgca
1501 tctttctggt gtcgcccatc accatcttgc atgagattga cgaggccagc ccgctcttcg
1561 gcatcagccg gcaggacctg gagacggacg actttgagat cgtggtcatc ctggaaggca
1621 tggtggaggc cacagccatg accacccagg cccgcagctc ctacctggcc aatgagatcc
1681 tgtggggtca ccgctttgag cccgtgctct tcgaggagaa gaaccagtac aagattgact
1741 actcgcactt ccacaagacc tatgaggtgc cctctacgcc ccgctgcagt gcgaaggatc
1801 tggtagagaa caagttcctg ctgcccagcg ccaactcctt ctgctacgag aacgagctgg
1861 ccttcctgag ccgtgacgag gaggatgagg cggacggaga ccaggacggc cgaagccggg
1921 acggcctcag cccccaggcc aggcatgact ttgacagact ccaggctggc ggcggggtcc
1981 tggagcagcg gccctacaga cgggagtcag agatctgagc caaccttggc cgacatgcag
2041 catccacccc cggctgggga gaggccccgc ggtcgctcag gggccccggg tttgagcaga
2101 acgggcccag tgccctgggt tgcagactca gtagcgtttt agtcgtttta tgtttctttg
2161 caacggcctc agaagtttgg ccggagaggg ggcagccaga gcggcagccc ccggcctcag
2221 aggctatcac aggctcaggg caaagaagtg gcctcctggg gggccaggcc acgagggcca
2281 gggcttctgc ctgaagatgg agctgcagcc tgcggggaag cagctcagct cgatggtggg
2341 cccagcctct gctgtccaag gctggctagc tgcggtgctc cttgctggtt tttaacttgg
2401 ggagaaacac cgggtttcag ctttcttgac cttagcttgg gtgagactgt ttacaaaaaa
2461 aaaaaaaaa
//