LOCUS       BC027971                3292 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens brevican, mRNA (cDNA clone MGC:34716 IMAGE:5309663),
            complete cds.
ACCESSION   BC027971
VERSION     BC027971.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3292)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3292)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (08-APR-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 49 Row: p Column: 4
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Similarity but not
            identity to protein.
FEATURES             Location/Qualifiers
     source          1..3292
                     /db_xref="H-InvDB:HIT000040384"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:34716 IMAGE:5309663"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..3292
                     /gene="BCAN"
                     /gene_synonym="BEHAB"
                     /gene_synonym="CSPG7"
                     /gene_synonym="MGC13038"
                     /db_xref="GeneID:63827"
                     /db_xref="HGNC:HGNC:23059"
                     /db_xref="MIM:600347"
     CDS             141..2876
                     /gene="BCAN"
                     /gene_synonym="BEHAB"
                     /gene_synonym="CSPG7"
                     /gene_synonym="MGC13038"
                     /codon_start=1
                     /product="brevican"
                     /protein_id="AAH27971.1"
                     /db_xref="GeneID:63827"
                     /db_xref="HGNC:HGNC:23059"
                     /db_xref="MIM:600347"
                     /translation="MAQLFLPLLAALVLAQAPAALADVLEGDSSEDRAFRVRIAGDAP
                     LQGVLGGALTIPCHVHYLRPPPSRRAVLGSPRVKWTFLSRGREAEVLVARGVRVKVNE
                     AYRFRVALPAYPASLTDVSLALSELRPNDSGIYRCEVQHGIDDSSDAVEVKVKGVVFL
                     YREGSARYAFSFSGAQEACARIGAHIATPEQLYAAYLGGYEQCDAGWLSDQTVRYPIQ
                     TPREACYGDMDGFPGVRNYGVVDPDDLYDVYCYAEDLNGELFLGDPPEKLTLEEARAY
                     CQERGAEIATTGQLYAAWDGGLDHCSPGWLADGSVRYPIVTPSQRCGGGLPGVKTLFL
                     FPNQTGFPNKHSRFNVYCFRDSAQPSAIPEASNPASNPASDGLEAIVTVTETLEELQL
                     PQEATESESRGAIYSIPIMEDGGGGSSTPEDPAEAPRTLLEFETQSMVPPTGFSEEEG
                     KALEEEEKYEDEEEKEEEEEEEEVEDEALWAWPSELSSPGPEASLPTEPAAQEKSLSQ
                     APARAVLQPGASPLPDGESEASRPPRVHGPPTETLPTPRERNLASPSPSTLVEAREVG
                     EATGGPELSGVPRGESEETGSSEGAPSLLPATRAPEGTRELEAPSEDNSGRTAPAGTS
                     VQAQPVLPTDSASRGGVAVVPASGDCVPSPCHNGGTCLEEEEGVRCLCLPGYGGDLCD
                     VGLRFCNPGWDAFQGACYKHFSTRRSWEEAETQCRMYGAHLASISTPEEQDFINNRYR
                     EYQWIGLNDRTIEGDFLWSDGVPLLYENWNPGQPDSYFLSGENCVVMVWHDQGQWSDV
                     PCNYHLSYTCKMGLVSCGPPPELPLAQVFGRPRLRYEVDTVLRYRCREGLAQRNLPLI
                     RCQENGRWEAPQISCVPRRPARALHPEEDPEGRQGRLLGRWKALLIPPSSPMPGP"
BASE COUNT          677 a         1025 c         1008 g          582 t
ORIGIN      
        1 ccacgcgtcc gctcgcgcag tctccgccgc agtctcagct gcagctgcag gactgagccg
       61 tgcacccgga ggagaccccc ggaggaggcg acaaacttcg cagtgccgcg acccaacccc
      121 agccctgggt agcctgcagc atggcccagc tgttcctgcc cctgctggca gccctggtcc
      181 tggcccaggc tcctgcagct ttagcagatg ttctggaagg agacagctca gaggaccgcg
      241 cttttcgcgt gcgcatcgcg ggcgacgcgc cactgcaggg cgtgctcggc ggcgccctca
      301 ccatcccttg ccacgtccac tacctgcggc caccgccgag ccgccgggct gtgctgggct
      361 ctccgcgggt caagtggact ttcctgtccc ggggccggga ggcagaggtg ctggtggcgc
      421 ggggagtgcg cgtcaaggtg aacgaggcct accggttccg cgtggcactg cctgcgtacc
      481 cagcgtcgct caccgacgtc tccctggcgc tgagcgagct gcgccccaac gactcaggta
      541 tctatcgctg tgaggtccag cacggcatcg atgacagcag cgacgctgtg gaggtcaagg
      601 tcaaaggggt cgtctttctc taccgagagg gctctgcccg ctatgctttc tccttttctg
      661 gggcccagga ggcctgtgcc cgcattggag cccacatcgc caccccggag cagctctatg
      721 ccgcctacct tgggggctat gagcaatgtg atgctggctg gctgtcggat cagaccgtga
      781 ggtatcccat ccagacccca cgagaggcct gttacggaga catggatggc ttccccgggg
      841 tccggaacta tggtgtggtg gacccggatg acctctatga tgtgtactgt tatgctgaag
      901 acctaaatgg agaactgttc ctgggtgacc ctccagagaa gctgacattg gaggaagcac
      961 gggcgtactg ccaggagcgg ggtgcagaga ttgccaccac gggccaactg tatgcagcct
     1021 gggatggtgg cctggaccac tgcagcccag ggtggctagc tgatggcagt gtgcgctacc
     1081 ccatcgtcac acccagccag cgctgtggtg ggggcttgcc tggtgtcaag actctcttcc
     1141 tcttccccaa ccagactggc ttccccaata agcacagccg cttcaacgtc tactgcttcc
     1201 gagactcggc ccagccttct gccatccctg aggcctccaa cccagcctcc aacccagcct
     1261 ctgatggact agaggctatc gtcacagtga cagagaccct ggaggaactg cagctgcctc
     1321 aggaagccac agagagtgaa tcccgtgggg ccatctactc catccccatc atggaggacg
     1381 gaggaggtgg aagctccact ccagaagacc cagcagaggc ccctaggacg ctcctagaat
     1441 ttgaaacaca atccatggta ccgcccacgg ggttctcaga agaggaaggt aaggcattgg
     1501 aggaagaaga gaaatatgaa gatgaagaag agaaagagga ggaagaagaa gaggaggagg
     1561 tggaggatga ggctctgtgg gcatggccca gcgagctcag cagcccgggc cctgaggcct
     1621 ctctccccac tgagccagca gcccaggaga agtcactctc ccaggcgcca gcaagggcag
     1681 tcctgcagcc tggtgcatca ccacttcctg atggagagtc agaagcttcc aggcctccaa
     1741 gggtccatgg accacctact gagactctgc ccactcccag ggagaggaac ctagcatccc
     1801 catcaccttc cactctggtt gaggcaagag aggtggggga ggcaactggt ggtcctgagc
     1861 tatctggggt ccctcgagga gagagcgagg agacaggaag ctccgagggt gccccttccc
     1921 tgcttccagc cacacgggcc cctgagggta ccagggagct ggaggccccc tctgaagata
     1981 attctggaag aactgcccca gcagggacct cagtgcaggc ccagccagtg ctgcccactg
     2041 acagcgccag ccgaggtgga gtggccgtgg tccccgcatc aggtgactgt gtccccagcc
     2101 cctgccacaa tggtgggaca tgcttggagg aggaggaagg ggtccgctgc ctatgtctgc
     2161 ctggctatgg gggggacctg tgcgatgttg gcctccgctt ctgcaacccc ggctgggacg
     2221 ccttccaggg cgcctgctac aagcactttt ccacacgaag gagctgggag gaggcagaga
     2281 cccagtgccg gatgtacggc gcgcatctgg ccagcatcag cacacccgag gaacaggact
     2341 tcatcaacaa ccggtaccgg gagtaccagt ggatcggact caacgacagg accatcgaag
     2401 gcgacttctt gtggtcggat ggcgtccccc tgctctatga gaactggaac cctgggcagc
     2461 ctgacagcta cttcctgtct ggagagaact gcgtggtcat ggtgtggcat gatcagggac
     2521 aatggagtga cgtgccctgc aactaccacc tgtcctacac ctgcaagatg gggctggtgt
     2581 cctgtgggcc gccaccggag ctgcccctgg ctcaagtgtt cggccgccca cggctgcgct
     2641 atgaggtgga cactgtgctt cgctaccggt gccgggaagg actggcccag cgcaatctgc
     2701 cgctgatccg atgccaagag aacggtcgtt gggaggcccc ccagatctcc tgtgtgccca
     2761 gaagacctgc ccgagctctg cacccagagg aggacccaga aggacgtcag gggaggctac
     2821 tgggacgctg gaaggcgctg ttgatccccc cttccagccc catgccaggt ccctaggggg
     2881 caaggccttg aacactgccg gccacagcac tgccctgtca cccaaatttt ccctcacacc
     2941 ctgcgctccc gccaccacag gaagtgacaa catgacgagg ggtggtgctg gagtccaggt
     3001 gacagttcct gaaggggctt ctgggaaata cctaggaggc tccagcccag cccaggccct
     3061 ctccccctac cctgggcacc agatcttcca tcagggccgg agtaaatccc taagtgcctc
     3121 aactgccctc tccctggcag ccatcttgtc ccctctattc ctctagggag cactgtgccc
     3181 actctttctg ggttttccaa gggaatgggc ttgcaggatg gagtgtctgt aaaatcaaca
     3241 ggaaataaaa ctgtgtatga gcccaggcaa aaaaaaaaaa aaaaaaaaaa aa
//