LOCUS BC027890 1307 bp mRNA linear HUM 06-OCT-2003
DEFINITION Homo sapiens carbonic anhydrase I, mRNA (cDNA clone MGC:34628
IMAGE:5222602), complete cds.
ACCESSION BC027890
VERSION BC027890.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1307)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: k Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4502516.
FEATURES Location/Qualifiers
source 1..1307
/db_xref="H-InvDB:HIT000040338"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34628 IMAGE:5222602"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1307
/gene="CA1"
/db_xref="GeneID:759"
/db_xref="MIM:114800"
CDS 85..870
/gene="CA1"
/codon_start=1
/product="CA1 protein"
/protein_id="AAH27890.1"
/db_xref="GeneID:759"
/db_xref="MIM:114800"
/translation="MASPDWGYDDKNGPEQWSKLYPIANGNNQSPVDIKTSETKHDTS
LKPISVSYNPATAKEIINVGHSFHVNFEDNDNRSVLKGGPFSDSYRLFQFHFHWGSTN
EHGSEHTVDGVKYSAELHVAHWNSAKYSSLAEAASKADGLAVIGVLMKVGEANPKLQK
VLDALQAIKTKGKRAPFTNFDPSTLLPSSLDFWTYPGSLTHPPLYESVTWIICKESIS
VSSEQLAQFRSLLSNVEGDNAVPMQHNNRPTQPLKGRTVRASF"
misc_feature 100..864
/gene="CA1"
/note="carb_anhydrase; Region: Eukaryotic-type carbonic
anhydrase"
/db_xref="CDD:pfam00194"
BASE COUNT 474 a 272 c 223 g 338 t
ORIGIN
1 cagtcctcag gtgcaacccc ctgcgtggtc ctctgtggca gccttctctc attcagagct
61 aaaaagaaaa ctcagtagaa gataatggca agtccagact ggggatatga tgacaaaaat
121 ggtcctgaac aatggagcaa gctgtatccc attgccaatg gaaataacca gtcccctgtt
181 gatattaaaa ccagtgaaac caaacatgac acctctctga aacctattag tgtctcctac
241 aacccagcca cagccaaaga aattatcaat gtggggcatt ccttccatgt aaattttgag
301 gacaacgata accgatcagt gctgaaaggt ggtcctttct ctgacagcta caggctcttt
361 cagttccatt ttcactgggg cagtacaaat gagcatggtt cagaacatac agtggatgga
421 gtcaaatatt ctgccgagct tcacgtagct cactggaatt ctgcaaagta ctccagcctt
481 gctgaagctg cctcaaaggc tgatggtttg gcagttattg gtgttttgat gaaggttggt
541 gaggccaacc caaagctgca gaaagtactt gatgccctcc aagcaattaa aaccaagggc
601 aaacgagccc cattcacaaa ttttgacccc tctactctcc ttccttcatc cctggatttc
661 tggacctacc ctggctctct gactcatcct cctctttatg agagtgtaac ttggatcatc
721 tgtaaggaga gcatcagtgt cagctcagag cagctggcac aattccgcag ccttctatca
781 aatgttgaag gtgataacgc tgtccccatg cagcacaaca accgcccaac ccaacctctg
841 aagggcagaa cagtgagagc ttcattttga tgattctgag aagaaacttg tccttcctca
901 agaacacagc cctgcttctg acataatcca gtaaaataat aatttttaag aaataaattt
961 atttcaatat tagcaagaca gcatgccttc aaatcaatct gtaaaactaa gaaacttaaa
1021 ttttagttct tactgcttaa ttcaaataat aattagtaag ctagcaaata gtaatctgta
1081 agcataagct tatgcttaaa ttcaagttta gtttgaggaa ttctttaaaa ttacaactaa
1141 gtgatttgta tgtctatttt tttcagttta tttgaaccaa taaaataatt ttatctcttt
1201 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//