LOCUS BC027888 793 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-C motif) ligand 3-like 1, mRNA (cDNA
clone MGC:34553 IMAGE:5222247), complete cds.
ACCESSION BC027888
VERSION BC027888.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 793)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 793)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: k Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48949908.
FEATURES Location/Qualifiers
source 1..793
/db_xref="H-InvDB:HIT000040336_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34553 IMAGE:5222247"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..793
/gene="CCL3L1"
/gene_synonym="464.2"
/gene_synonym="G0S19-2"
/gene_synonym="LD78"
/gene_synonym="LD78BETA"
/gene_synonym="MGC12815"
/db_xref="GeneID:6349"
/db_xref="HGNC:HGNC:10628"
/db_xref="MIM:601395"
CDS 74..355
/gene="CCL3L1"
/gene_synonym="464.2"
/gene_synonym="G0S19-2"
/gene_synonym="LD78"
/gene_synonym="LD78BETA"
/gene_synonym="MGC12815"
/codon_start=1
/product="chemokine (C-C motif) ligand 3-like 1"
/protein_id="AAH27888.1"
/db_xref="GeneID:6349"
/db_xref="HGNC:HGNC:10628"
/db_xref="MIM:601395"
/translation="MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIP
QNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA"
BASE COUNT 187 a 216 c 184 g 206 t
ORIGIN
1 gcagcaaaga gtagtcagtc ccttcttggc tctgctgaca ctcgagccca cattccatca
61 cctgctccca atcatgcagg tctccactgc tgcccttgcc gtcctcctct gcaccatggc
121 tctctgcaac caggtcctct ctgcaccact tgctgctgac acgccgaccg cctgctgctt
181 cagctacacc tcccgacaga ttccacagaa tttcatagct gactactttg agacgagcag
241 ccagtgctcc aagcccagtg tcatcttcct aaccaagaga ggccggcagg tctgtgctga
301 ccccagtgag gagtgggtcc agaaatacgt cagtgacctg gagctgagtg cctgaggggt
361 ccagaagctt cgaggcccag cgacctcagt gggcccagtg gggaggagca ggagcctgag
421 ccttgggaac atgcgtgtga cctctacagc tacctcttct atggactggt tattgccaaa
481 cagccacact gtgggactct tcttaactta aattttaatt tatttatact atttagtttt
541 tataatttat ttttgatttc acagtgtgtt tgtgattgtt tgctctgaga gttccccctg
601 tcccctccac cttccctcac agtgtgtctg gtgacgaccg agtggctgtc atcggcctgt
661 gtaggcagtc atggcaccaa agccaccaga ctgacaaatg tgtatcagat gcttttgttc
721 agggctgtga tcggcctggg gaaataataa agatgttctt ttaaacggta aaaaaaaaaa
781 aaaaaaaaaa aaa
//