LOCUS BC027884 1895 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens solute carrier family 39 (metal ion transporter),
member 5, mRNA (cDNA clone MGC:34778 IMAGE:5221329), complete cds.
ACCESSION BC027884
VERSION BC027884.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1895)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1895)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: k Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27734776.
FEATURES Location/Qualifiers
source 1..1895
/db_xref="H-InvDB:HIT000040335"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34778 IMAGE:5221329"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1895
/gene="SLC39A5"
/gene_synonym="LZT-Hs7"
/gene_synonym="MGC34778"
/gene_synonym="ZIP5"
/db_xref="GeneID:283375"
/db_xref="HGNC:HGNC:20502"
/db_xref="MIM:608730"
CDS 106..1725
/gene="SLC39A5"
/gene_synonym="LZT-Hs7"
/gene_synonym="MGC34778"
/gene_synonym="ZIP5"
/codon_start=1
/product="solute carrier family 39 (metal ion
transporter), member 5"
/protein_id="AAH27884.1"
/db_xref="GeneID:283375"
/db_xref="HGNC:HGNC:20502"
/db_xref="MIM:608730"
/translation="MGSPVSHLLAGFCVWVVLGWVGGSVPNLGPAEQEQNHYLAQLFG
LYGENGTLTAGGLARLLHSLGLGRVQGLRLGQHGPLTGRAASPAADNSTHRPQNPELS
VDVWAGMPLGPSGWGDLEESKAPHLPRGPAPSGLDLLHRLLLLDHSLADHLNEDCLNG
SQLLVNFGLSPAAPLTPRQFALLCPALLYQIDSRVCIGAPAPAPPGDLLSALLQSALA
VLLLSLPSPLSLLLLRLLGPRLLRPLLGFLGALAVGTLCGDALLHLLPHAQEGRHAGP
GGLPEKDLGPGLSVLGGLFLLFVLENMLGLLRHRGLRPRCCRRKRRNLETRNLDPENG
SGMALQPLQAAPEPGAQGQREKNSQHPPALAPPGHQGHSHGHQGGTDITWMVLLGDGL
HNLTDGLAIGAAFSDGFSSGLSTTLAVFCHELPHELGDFAMLLQSGLSFRRLLLLSLV
SGALGLGGAVLGVGLSLGPVPLTPWVFGVTAGVFLYVALVDMLPALLRPPEPLPTPHV
LLQGLGLLLGGGLMLAITLLEERLLPVTTEG"
BASE COUNT 360 a 577 c 576 g 382 t
ORIGIN
1 gtctacagca aggcctaata ggggacctga gggcacagtc ctcaggatgt ttcggggaga
61 ataggagcca gaacctgagc ccctaagcca ttcccctcac caatgatggg gtccccagtg
121 agtcatctgc tggccggctt ctgtgtgtgg gtcgtcttgg gctgggtagg gggctcagtc
181 cccaacctgg gccctgctga gcaggagcag aaccattacc tggcccagct gtttggcctg
241 tacggcgaga atgggacgct gactgcaggg ggcttggcgc ggcttctcca cagcctgggg
301 ctaggccgag ttcaggggct tcgcctggga cagcatgggc ctctgactgg acgggctgca
361 tccccagctg cagacaattc cacacacagg ccacagaacc ctgagctgag tgtggatgtc
421 tgggcaggga tgcctctggg tccctcaggg tggggtgacc tggaagagtc aaaggcccct
481 cacctacccc gtgggccagc cccctcgggc ctggacctcc ttcacaggct tctgttgctg
541 gaccactcat tggctgacca cctgaatgag gattgtctga acggctccca gctgctggtc
601 aattttggct tgagccccgc tgctcctctg acccctcgtc agtttgctct gctgtgccca
661 gccctgcttt atcagatcga cagccgcgtc tgcatcggcg ctccggcccc tgcaccccca
721 ggggatctac tatctgccct gcttcagagt gccctggcag tcctgttgct cagcctccct
781 tctcccctat ccctgctgct gctgcggctc ctgggacctc gtctactacg gcccttgctg
841 ggcttcctgg gggccctggc ggtgggcact ctttgtgggg atgcactgct acatctgcta
901 ccgcatgcac aagaagggcg gcacgcagga cctggcggac taccagagaa ggacctgggc
961 ccggggctgt cagtgctcgg aggcctcttc ctgctctttg tgctggagaa catgctgggg
1021 cttttgcggc accgagggct caggccaaga tgctgcaggc gaaaacgaag gaatctcgaa
1081 acacgcaact tggatccgga gaatggcagt gggatggccc ttcagcccct acaggcagct
1141 ccagagccag gggctcaggg ccagagggag aagaacagcc agcacccacc agctctggcc
1201 cctcctgggc accaaggcca cagtcatggg caccagggtg gcactgatat cacgtggatg
1261 gtcctcctgg gagatggtct acacaacctc actgatgggc tggccatagg tgctgccttc
1321 tctgatggct tctccagcgg cctcagtacc accttagcgg tcttctgcca tgagctgccc
1381 cacgaactgg gtgactttgc catgctgctc cagtcagggc tgtcctttcg gcggctgctg
1441 ctgctgagcc tcgtgtctgg agccctggga ttggggggtg cagtcctggg ggtggggctc
1501 agcctgggcc ctgtccccct cactccctgg gtgtttgggg tcactgctgg ggtcttcctc
1561 tatgtggccc ttgtggacat gctaccagcc ctgcttcgtc ctccggagcc cctgcctacg
1621 ccccatgtgc tcctgcaggg gctggggctg ctgctggggg gcggcctcat gcttgccata
1681 accctgctgg aggagcggct actgcccgtg accactgagg gctgatgggg ccagtggaaa
1741 ggggtcgggt tgcccttcct tccccccaac cacaggaatg gaggcgggac acagggccag
1801 taggagcaat aggattttaa taaacagaac ccatcccaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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