LOCUS BC027881 2098 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens alpha-fetoprotein, mRNA (cDNA clone MGC:34639 IMAGE:5208299), complete cds. ACCESSION BC027881 VERSION BC027881.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2098) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2098) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 49 Row: i Column: 12. FEATURES Location/Qualifiers source 1..2098 /db_xref="H-InvDB:HIT000040332" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34639 IMAGE:5208299" /tissue_type="Lung, Spleen, fetal, pooled" /clone_lib="NIH_MGC_122" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2098 /gene="AFP" /gene_synonym="FETA" /db_xref="GeneID:174" /db_xref="HGNC:HGNC:317" /db_xref="MIM:104150" CDS 31..1860 /gene="AFP" /gene_synonym="FETA" /codon_start=1 /product="alpha-fetoprotein" /protein_id="AAH27881.1" /db_xref="GeneID:174" /db_xref="HGNC:HGNC:317" /db_xref="MIM:104150" /translation="MKWVESIFLIFLLNFTESRTLHRNEYGIASILDSYQCTAEISLA DLATIFFAQFVQEATYKEVSKMVKDALTAIEKPTGDEQSSGCLENQLPAFLEELCHEK EILEKYGHSDCCSQSEEGRHNCFLAHKKPTPASIPLFQVPEPVTSCEAYEEDRETFMN KFIYEIARRHPFLYAPTILLWAARYDKIIPSCCKAENAVECFQTKAATVTKELRESSL LNQHACAVMKNFGTRTFQAITVTKLSQKFTKVNFTEIQKLVLDVAHVHEHCCRGDVLD CLQDGEKIMSYICSQQDTLSNKITECCKLTTLERGQCIIHAENDEKPEGLSPNLNRFL GDRDFNQFSSGEKNIFLASFVHEYSRRHPQLAVSVILRVAKGYQELLEKCFQTENPLE CQDKGEEELQKYIQESQALAKRSCGLFQKLGEYYLQNAFLVAYTKKAPQLTSSELMAI TRKMAATAATCCQLSEDKLLACGEGAADIIIGHLCIRHEMTPVNPGVGQCCTSSYANR RPCFSSLVVDETYVPPAFSDDKFIFHKDLCQAQGVALQTMKQEFLINLVKQKPQITEE QLEAVIADFSGLLEKCCQGQEQEVCFAEEGQKLISKTRAALGV" BASE COUNT 745 a 403 c 423 g 527 t ORIGIN 1 ccactgccaa taacaaaata actagcaacc atgaagtggg tggaatcaat ttttttaatt 61 ttcctactaa attttactga atccagaaca ctgcatagaa atgaatatgg aatagcttcc 121 atattggatt cttaccaatg tactgcagag ataagtttag ctgacctggc taccatattt 181 tttgcccagt ttgttcaaga agccacttac aaggaagtaa gcaaaatggt gaaagatgca 241 ttgactgcaa ttgagaaacc cactggagat gaacagtctt cagggtgttt agaaaaccag 301 ctacctgcct ttctggaaga actttgccat gagaaagaaa ttttggagaa gtacggacat 361 tcagactgct gcagccaaag tgaagaggga agacataact gttttcttgc acacaaaaag 421 cccactccag catcgatccc acttttccaa gttccagaac ctgtcacaag ctgtgaagca 481 tatgaagaag acagggagac attcatgaac aaattcattt atgagatagc aagaaggcat 541 cccttcctgt atgcacctac aattcttctt tgggctgctc gctatgacaa aataattcca 601 tcttgctgca aagctgaaaa tgcagttgaa tgcttccaaa caaaggcagc aacagttaca 661 aaagaattaa gagaaagcag cttgttaaat caacatgcat gtgcagtaat gaaaaatttt 721 gggacccgaa ctttccaagc cataactgtt actaaactga gtcagaagtt taccaaagtt 781 aattttactg aaatccagaa actagtcctg gatgtggccc atgtacatga gcactgttgc 841 agaggagatg tgctggattg tctgcaggat ggggaaaaaa tcatgtccta catatgttct 901 caacaagaca ctctgtcaaa caaaataaca gaatgctgca aactgaccac gctggaacgt 961 ggtcaatgta taattcatgc agaaaatgat gaaaaacctg aaggtctatc tccaaatcta 1021 aacaggtttt taggagatag agattttaac caattttctt caggggaaaa aaatatcttc 1081 ttggcaagtt ttgttcatga atattcaaga agacatcctc agcttgctgt ctcagtaatt 1141 ctaagagttg ctaaaggata ccaggagtta ttggagaagt gtttccagac tgaaaaccct 1201 cttgaatgcc aagataaagg agaagaagaa ttacagaaat acatccagga gagccaagca 1261 ttggcaaagc gaagctgcgg cctcttccag aaactaggag aatattactt acaaaatgcg 1321 tttctcgttg cttacacaaa gaaagccccc cagctgacct cgtcggagct gatggccatc 1381 accagaaaaa tggcagccac agcagccact tgttgccaac tcagtgagga caaactattg 1441 gcctgtggcg agggagcggc tgacattatt atcggacact tatgtatcag acatgaaatg 1501 actccagtaa accctggtgt tggccagtgc tgcacttctt catatgccaa caggaggcca 1561 tgcttcagca gcttggtggt ggatgaaaca tatgtccctc ctgcattctc tgatgacaag 1621 ttcattttcc ataaggatct gtgccaagct cagggtgtag cgctgcaaac gatgaagcaa 1681 gagtttctca ttaaccttgt gaagcaaaag ccacaaataa cagaggaaca acttgaggct 1741 gtcattgcag atttctcagg cctgttggag aaatgctgcc aaggccagga acaggaagtc 1801 tgctttgctg aagagggaca aaaactgatt tcaaaaactc gtgctgcttt gggagtttaa 1861 attacttcag gggaagagaa gacaaaacga gtctttcatt cggtgtgaac ttttctcttt 1921 aattttaact gatttaacac tttttgtgaa ttaatgaaat gataaagact tttatgtgag 1981 atttccttat cacagaaata aaatatctcc aaatgttaaa aaaaaaaaaa aaaaaaaaaa 2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaa //