LOCUS BC027867 2658 bp mRNA linear HUM 12-NOV-2003
DEFINITION Homo sapiens SLAM family member 7, mRNA (cDNA clone MGC:34188
IMAGE:5203638), complete cds.
ACCESSION BC027867
VERSION BC027867.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2658)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2658)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: e Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19923571.
FEATURES Location/Qualifiers
source 1..2658
/db_xref="H-InvDB:HIT000040324"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34188 IMAGE:5203638"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2658
/gene="SLAMF7"
/gene_synonym="19A"
/gene_synonym="CRACC"
/gene_synonym="CS1"
/db_xref="GeneID:57823"
/db_xref="MIM:606625"
CDS 12..902
/gene="SLAMF7"
/gene_synonym="19A"
/gene_synonym="CRACC"
/gene_synonym="CS1"
/codon_start=1
/product="SLAMF7 protein"
/protein_id="AAH27867.1"
/db_xref="GeneID:57823"
/db_xref="MIM:606625"
/translation="MAGSPTCLTLIYILWQLTGSAASGPVKELVGSVGGAVTFPLKSK
VKQVDSIVWTFNTTPLVTIQPEGGTIIVTQNRNRERVDFPDGGYSLKLSKLKKNDSGI
YYVGIYSSSLQQPSTQEYVLHVYEHLSKPKVTMGLQSNKNGTCVTNLTCCMEHGEEDV
IYTWKALGQAANESHNGSILPISWRWGESDMTFICVARNPVSRNFSSPILARKLCEGA
ADDPDSSMVLLCLLLVPLLLSLFVLGLFLWFLKRERQEENNPKGRSSKYGLLHCGNTE
KDGKSPLTAHDARHTKAICL"
BASE COUNT 873 a 587 c 597 g 601 t
ORIGIN
1 cagagagcaa tatggctggt tccccaacat gcctcaccct catctatatc ctttggcagc
61 tcacagggtc agcagcctct ggacccgtga aagagctggt cggttccgtt ggtggggccg
121 tgactttccc cctgaagtcc aaagtaaagc aagttgactc tattgtctgg accttcaaca
181 caacccctct tgtcaccata cagccagaag ggggcactat catagtgacc caaaatcgta
241 atagggagag agtagacttc ccagatggag gctactccct gaagctcagc aaactgaaga
301 agaatgactc agggatctac tatgtgggga tatacagctc atcactccag cagccctcca
361 cccaggagta cgtgctgcat gtctacgagc acctgtcaaa gcctaaagtc accatgggtc
421 tgcagagcaa taagaatggc acctgtgtga ccaatctgac atgctgcatg gaacatgggg
481 aagaggatgt gatttatacc tggaaggccc tggggcaagc agccaatgag tcccataatg
541 ggtccatcct ccccatctcc tggagatggg gagaaagtga tatgaccttc atctgcgttg
601 ccaggaaccc tgtcagcaga aacttctcaa gccccatcct tgccaggaag ctctgtgaag
661 gtgctgctga tgacccagat tcctccatgg tcctcctgtg tctcctgttg gtgcccctcc
721 tgctcagtct ctttgtactg gggctatttc tttggtttct gaagagagag agacaagaag
781 agaacaatcc taaaggaaga tccagcaaat acggtttact ccactgtgga aataccgaaa
841 aagatggaaa atccccactc actgctcacg atgccagaca caccaaggct atttgcctat
901 gagaatgtta tctagacagc agtgcactcc cctaagtctc tgctcaaaaa aaaaacaatt
961 ctcggcccaa agaaaacaat cagaagaatt cactgatttg actagaaaca tcaaggaaga
1021 atgaagaacg ttgacttttt tccaggataa attatctctg atgcttcttt agatttaaga
1081 gttcataatt ccatccactg ctgagaaatc tcctcaaacc cagaaggttt aatcacttca
1141 tcccaaaaat gggattgtga atgtcagcaa accataaaaa aagtgcttag aagtattcct
1201 ataaaaatgt aaatgcaagg tcacacatat taatgacagc ctgttgtatt aatgatggct
1261 ccaggtcagt gtctggagtt tcattccatc ccagggcttg gatgtcagga ttataccaag
1321 agtcttgcta ccaggagggc aagaagacca aaacagacag acaagtccag cagaagcaga
1381 tgcacctgac aaaaagggat gtattaattg gctctataaa ctatgtgccc agcactatgc
1441 tgagcttaca ctaattggtc agacatgctg tctgccctca tgaaattggc tccaaatgaa
1501 tgaactactt tcatgagcag ttgtagcagg cctgaccaca gattcccaga gggccaggtg
1561 tggatccaca ggacttgaag gtcaaagttc acaaagatga agaatcaggg tagctgacca
1621 tgtttggcag atactataat ggagacacag aagtgtgcat ggcccaagga caaggacctc
1681 cagccaggct tcatttatgc acttgtgctg caaaagaaaa gtctaggttt taaggctgtg
1741 ccagaaccca tcccaataaa gagaccgagt ctgaagtcac attgtaaatc tagtgtagga
1801 gacttggagt caggcagtga gactggtggg gcacgggggg cagtgggtac ttgtaaacct
1861 ttaaagatgg ttaattcatt caatagatat ttattaagaa cctatgcggc ccggcatggt
1921 ggctcacacc tgtaatccca gcactttggg aggccaaggt gggtgggtca tctgaggtca
1981 ggagttcaag accagcctgg ccaacatggt gaaaccccat ctctactaaa gatacaaaaa
2041 tttgctgagc gtggtggtgt gcacctgtaa tcccagctac tcgagaggcc aaggcatgag
2101 aatcgcttga acctgggagg tggaggttgc agtgagctga gatggcacca ctgcactccg
2161 gcctaggcaa cgagagcaaa actccaatac aaacaaacaa acaaacacct gtgctaggtc
2221 agtctggcac gtaagatgaa catccctacc aacacagagc tcaccatctc ttatacttaa
2281 gtgaaaaaca tggggaaggg gaaaggggaa tggctgcttt tgatatgttc cctgacacat
2341 atcttgaatg gagacctccc taccaagtga tgaaagtgtt gaaaaactta ataacaaatg
2401 cttgttgggc aagaatggga ttgaggatta tcttctctca gaaaggcatt gtgaaggaat
2461 tgagccagat ctctctccct actgcaaaac cctattgtag taaaaaagtc ttctttacta
2521 tcttaataaa acagatattg tgagattcac ataaaaaaaa aaaaaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2641 aaaaaaaaaa aaaaaaaa
//