LOCUS BC027724 2066 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens AVL9 homolog (S. cerevisiase), mRNA (cDNA clone
MGC:23182 IMAGE:4811237), complete cds.
ACCESSION BC027724
VERSION BC027724.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2066)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2066)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC027724.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57529130.
FEATURES Location/Qualifiers
source 1..2066
/db_xref="H-InvDB:HIT000040306"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23182 IMAGE:4811237"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2066
/gene="AVL9"
/db_xref="GeneID:23080"
/db_xref="HGNC:HGNC:28994"
CDS 137..1528
/gene="AVL9"
/codon_start=1
/product="AVL9 protein"
/protein_id="AAH27724.1"
/db_xref="GeneID:23080"
/db_xref="HGNC:HGNC:28994"
/translation="MEKARRGGDGVPRGPVLHIVVVGFHHKKGCQVEFSYPPLIPGDG
HDSHTLPEEWKYLPFLALPDGAHNYQEDTVFFHLPPRNGNGATVFGISCYRQIEAKAL
KVRQADITRETVQKSVCVLSKLPLYGLLQAKLQLITHAYFEEKDFSQISILKELYEHM
NSSLGGASLEGSQVYLGLSPRDLVLHFRHKVLILFKLILLEKKVLFYISPVNKLVGAL
MTVLSLFPGMIEHGLSDCSQYRPRKSMSEDGGLQESNPCADDFVSASTADVSHTNLGT
IRKVMAGNHGEDAAMKTEEPLFQVEDSSKGQEPNDTNQYLKPPSRPSPDSSESDWETL
DPSVLEDPNLKEREQLGSDQTNLFPKDSVPSESLPITVQPQANTGQVVLIPGLISGLE
EDQYGMPLAIFTKCTQDVLPQANHSFKFLITDRRITPRPLRRRLVSATLTNMLQEKSC
WKKHIKCRRRVQK"
BASE COUNT 632 a 427 c 449 g 558 t
ORIGIN
1 caccgatctc cctgtggggc cctcatgtgc tgtgctcgct gacacccgaa gtccgcggct
61 ttccgcacac ggtggggtcg tcagacccgc tgcccttggc ggtcgaagtc gtcgtgcggg
121 cccgcggcgg ccgcccatgg agaaggccag gagaggcggg gatggcgtcc cccgggggcc
181 cgtactgcac atcgtggtgg tcggatttca ccacaagaag ggctgccagg ttgaattctc
241 ttacccgccc ctgattccag gagatggaca tgacagccac actttacctg aagaatggaa
301 gtatttgccc ttccttgcct taccagatgg cgcacacaac taccaggaag atactgtgtt
361 ttttcacttg ccacccagaa atggaaatgg agccacagta tttggtatct cttgctatcg
421 acaaattgaa gccaaggcac tgaaagtaag gcaagcagat atcaccagag agactgttca
481 gaaaagtgtc tgtgttctaa gcaagctgcc tctgtatggt ttacttcaag caaaacttca
541 actcattaca catgcatatt ttgaagagaa ggatttttcc caaatttcta ttctaaagga
601 gctttatgaa catatgaata gttccttggg aggtgcttca ttagaaggat cccaagtata
661 tcttggtctg tcacctcgag atcttgtcct tcattttcga cacaaggtct taatcctatt
721 taagctaatt cttcttgaaa aaaaggttct tttttatatt tctccagtga ataaattggt
781 gggtgcactg atgactgtgt tatccctttt tccaggcatg attgaacatg gtctcagtga
841 ctgttctcag tatagacccc ggaaaagtat gtctgaagat ggtgggcttc aggaaagtaa
901 cccatgtgca gatgattttg tttctgcatc cactgctgat gtttcacata ccaacttggg
961 aactatcagg aaagtcatgg caggaaacca tggagaagat gctgccatga agactgagga
1021 gcctttgttc caagtggaag acagcagcaa agggcaggaa cccaatgata ccaatcaata
1081 tttgaaacct ccatctcgcc catctccaga ttcttcagaa agtgactggg aaactttgga
1141 tcctagtgtc ttagaggacc ccaacttgaa agaaagggaa cagctgggat cagaccagac
1201 aaatttgttt ccaaaggact ctgtcccctc agagagtctt ccaattactg tacaacctca
1261 agctaatacg ggacaggtag tcctgatacc agggctcatt tcgggtttgg aagaggatca
1321 gtatggcatg cccctggcca tcttcacaaa gtgtacccaa gatgtcttac ctcaggcaaa
1381 tcacagcttc aagtttttga taacggatag gagaatcaca ccaagaccac ttcgaagaag
1441 gctggtttct gctacactaa caaatatgct tcaagagaag agttgctgga aaaaacacat
1501 caagtgtaga agacgtgttc aaaaatagaa aatactgccc ttgatctacg aactctcttc
1561 aaaggaagtt ttaacatttt aagtcttcag agtctttaaa tgtgaactgg aaaatgtgga
1621 aactggaaaa taattacttt gtgtgctttt tgtatgagat taaggtctct actatagcag
1681 agttctttac aaggaatatg taggacaagt ctaaagactg aagcaagagg taagaacttc
1741 acttaacaca aacttgataa ctgaaaactt tagttatcac agtatttcat tctgatgata
1801 gtttacaagt caattaatga aaattgattg gtatgtctac atgaaaaaaa attacctgat
1861 ttaaagcaag tcttaaagta cctgaatgca aactgattac ttttaaaggt ctacttgact
1921 ctgtcttaca ggaaagtgaa aaagattaaa ttcatgaata tagctttaaa aactgtgact
1981 gctttaattg tgatactcgc agaaacatgt aaactacatt gataaggtaa taaaattgtg
2041 aatgctaaaa aaaaaaaaaa aaaaaa
//