LOCUS BC027720 2722 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens leucine rich repeat neuronal 4, mRNA (cDNA clone
MGC:20770 IMAGE:4588586), complete cds.
ACCESSION BC027720
VERSION BC027720.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2722)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2722)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC027720.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 30 Row: l Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34303942.
FEATURES Location/Qualifiers
source 1..2722
/db_xref="H-InvDB:HIT000040305"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:20770 IMAGE:4588586"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2722
/gene="LRRN4"
/gene_synonym="dJ1056H1.1"
/gene_synonym="NLRR4"
/db_xref="GeneID:164312"
/db_xref="HGNC:HGNC:16208"
CDS 207..2429
/gene="LRRN4"
/gene_synonym="dJ1056H1.1"
/gene_synonym="NLRR4"
/codon_start=1
/product="leucine rich repeat neuronal 4"
/protein_id="AAH27720.1"
/db_xref="GeneID:164312"
/db_xref="HGNC:HGNC:16208"
/translation="MRQTLPLLLLTVLRPSWADPPQEKVPLFRVTQQGPWGSSGSNAT
DSPCEGLPAADATALTLANRNLERLPGCLPRTLRSLDASHNLLRALSTSELGHLEQLQ
VLTLRHNRIAALRWGPGGPAGLHTLDLSYNQLAALLPCTGPALSSLRALALAGNPLRA
LQPRAFACFPALQLLNLSCTALGRGAQGGIAEAAFAGEDGAPLVTLEVLDLSGTFLER
VESGWIRDLPKLTSLYLRKMPRLTTLEGDIFKMTPNLQQLDCQDSPALASVATHIFQD
TPHLQVLLFQNCNLSSFPPWTLDSSQVLSINLFGNPLTCSCDLSWLLTDAKRTVLSRA
ADTMCAPAAGSSGPFSASLSLSQLPGVCQSDQSTTLGASHPPCFNRSTYAQGTTVAPS
AAPATRPAGDQQSVSKAPNVGSRTIAAWPHSDAREGTAPSTTNSVAGHSNSSVFPRAA
STTRTQHRGEHAPELVLEPDISAASTPLASKLLGPFPTSWDRSISSPQPGQRTHATPQ
APNPSLSEGEIPVLLLDDYSEEEEGRKEEVGTPHQDVPCDYHPCKHLQTPCAELQRRW
RCRCPGLSGEDTIPDPPRLQGVTETTDTSALVHWCAPNSVVHGYQIRYSAEGWAGNQS
VVGVIYATARQHPLYGLSPGTTYRVCVLAANRAGLSQPRSSGWRSPCAAFTTKPSFAL
LLSGLCAASGLLLASTVVLSACLCRRGQTLGLQRCDTHLVAYKNPAFDDYPLGLQTVS
"
BASE COUNT 544 a 949 c 773 g 456 t
ORIGIN
1 gagcaatggg aaagactgga gtatctcagt ccctctcagt ggatgggggt tgtgggagag
61 aggcagctgg gagacaggcc tccctctgga gttcatagct gagttgctgt ccaaatcagt
121 ggtccctaga atctataaaa caaaactgag aacttcagag gtgcatccag agaagccaca
181 ctccaaaagg accacttcca gacgccatgc ggcaaaccct accgctgctg ctgctgacgg
241 tgctgcgccc cagctgggca gaccctcccc aggagaaggt cccgctcttc cgggtcactc
301 agcagggccc ctgggggagc agtggcagca acgccaccga ctcgccctgc gaggggctgc
361 ccgccgcgga tgcgacggcc ttgaccctgg cgaaccgcaa cctggagcgc ctgcccggct
421 gcctaccgcg cacactgcgc agcctcgacg ccagccacaa cctgctgcgc gccctgagca
481 cttccgagct cggccacctg gagcagctgc aggtgctgac cctgcgccac aaccgcatcg
541 ccgcgctgcg ctggggcccg ggtgggccgg cggggctgca caccctggac ctcagctaca
601 accagctggc cgctctgctg ccgtgcaccg ggcccgcgct gagcagcctc cgcgccctgg
661 cgctcgccgg gaatccgctg cgggcgctgc agccccgggc cttcgcctgc ttccccgcgc
721 tgcaactcct caacctctcc tgcaccgcgc tgggtcgcgg agcccagggg ggcatcgccg
781 aggcggcgtt cgctggagag gatggcgcgc ccctggtcac gctcgaagtc ctggatctca
841 gcggcacgtt ccttgaacgg gttgagtcag ggtggatcag agacctgccg aagctcacat
901 ccctctacct gaggaagatg cctcggctga cgaccctgga gggggacatt ttcaagatga
961 cccccaacct gcagcagctg gactgtcagg actccccagc acttgcttct gtcgccacac
1021 acatctttca agatactcca catctacagg tccttctgtt ccagaactgc aacttgagtt
1081 ccttccctcc ttggaccctg gattcctccc aggtcctatc gatcaacctc tttggcaacc
1141 ccctcacttg cagttgtgac ttgtcttggc tcctcacgga tgcaaagaga actgtcctaa
1201 gcagggcagc agacactatg tgcgcgccag ctgcgggatc cagcggcccc ttctcagcct
1261 ccctgtcact ctcccagctg cccggagtgt gccagtccga ccaaagcacc actctcgggg
1321 cttcacaccc accttgcttc aaccgctcca cctacgcaca gggtaccacc gtcgcgccca
1381 gcgcagcccc cgccacccgg cctgcgggag accagcagag tgtctccaag gcccctaacg
1441 tgggctctcg cacgatagct gcatggccgc acagcgatgc acgggagggg actgccccct
1501 ccacgaccaa ctctgtagca ggtcacagca actccagcgt tttccccagg gctgccagca
1561 ccaccaggac ccagcaccga ggagaacatg cccccgagct tgtccttgag cctgatatct
1621 cagctgcctc caccccactg gccagcaagc tcctgggccc cttccctacc tcgtgggacc
1681 gcagcataag ctcgcctcag cccggccaga ggacacacgc cacaccccaa gcccccaacc
1741 cgagtctttc cgagggcgag attccagtct tgctgctgga cgactacagt gaggaggagg
1801 aagggaggaa ggaggaggtg ggaacgcctc accaggacgt cccctgtgat taccatccct
1861 gcaagcacct gcagaccccg tgcgcggagc tgcagaggcg gtggcggtgc cggtgccccg
1921 gcctcagcgg ggaagacacc atcccagacc cgcccaggct gcagggggtg acggagacca
1981 cggacacgtc ggcgctggtc cactggtgtg cccccaactc ggtagtgcat gggtaccaga
2041 tccgctactc tgcggagggc tgggcgggga accagtcggt ggtgggggtc atctacgcca
2101 cggcccggca gcaccctctg tacgggctgt cgccgggcac cacctaccgc gtgtgcgtgc
2161 tggcggccaa cagggcgggc ttgagccagc cacggtcttc gggctggagg agcccgtgcg
2221 ccgccttcac caccaagccc agcttcgcgc tcctgctctc tgggctgtgc gccgccagcg
2281 gcctgttgct cgccagcacc gtggtgctgt ccgcatgtct ctgcaggcgg ggccagacgc
2341 tgggcctgca gcgctgcgac acgcacctgg tggcctacaa aaacccggcc tttgatgatt
2401 acccgctggg gctccagacc gtcagttagc ccagcttctg ggataacgcg tctcatcgaa
2461 ctggatctga gcgcaaaaag gaagacacag acggtcaaaa acgaccccat ccgctcctag
2521 ggtttctaat tcccgtgaag ccagaatgcc ttgagcacac atggaacttg ccacactgag
2581 tgtctgggtc caaggaactg ctgccctccc ttccttctac ttaactctgt tcccagaaac
2641 ctgatggtca atgccagatc gctccccact gcaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2701 aaaaataaaa aaaaaaaaaa aa
//