LOCUS BC027713 2947 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 1, mRNA
(cDNA clone MGC:16645 IMAGE:4123077), complete cds.
ACCESSION BC027713
VERSION BC027713.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2947)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2947)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC027713.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 26 Row: e Column: 4.
FEATURES Location/Qualifiers
source 1..2947
/db_xref="H-InvDB:HIT000040302"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:16645 IMAGE:4123077"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2947
/gene="HNRPUL1"
/gene_synonym="E1B-AP5"
/gene_synonym="E1BAP5"
/gene_synonym="FLJ12944"
/db_xref="GeneID:11100"
/db_xref="HGNC:HGNC:17011"
/db_xref="MIM:605800"
CDS 54..2468
/gene="HNRPUL1"
/gene_synonym="E1B-AP5"
/gene_synonym="E1BAP5"
/gene_synonym="FLJ12944"
/codon_start=1
/product="heterogeneous nuclear ribonucleoprotein U-like
1"
/protein_id="AAH27713.1"
/db_xref="GeneID:11100"
/db_xref="HGNC:HGNC:17011"
/db_xref="MIM:605800"
/translation="MDVRRLKVNELREELQRRGLDTRGLKAELAERLQAALEAEEPDD
ERELDADDEPGRPGHINEEVETEGGSELEGTAQPPPPGLQPHAEPGGYSGPDGHYAMD
NITRQNQFYDTQVIKQENESGYERRPLEMEQQQAYRPEMKTEMKQGAPTSFLPPEASQ
LKPDRQQFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDDTLVAIDTYNC
DLHFKVARDRSSGYPLTIEGFAYLWSGARASYGVRRGRVCFEMKINEEISVKHLPSTE
PDPHVVRIGWSLDSCSTQLGEEPFSYGYGGTGKKSTNSRFENYGDKFAENDVIGCFAD
FECGNDVELSFTKNGKWMGIAFRIQKEALGGQALYPHVLVKNCAVEFNFGQRAEPYCS
VLPGFTFIQHLPLSERIRGTVGPKSKAECEILMMVGLPAAGKTTWAIKHAASNPSKKY
NILGTNAIMDKMRVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQTN
VYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRTIKRTDEEGKDVPDHAVLEMKANFT
LPDVGDFLDEVLFIELQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGG
GFQRYENRGPPGGNRGGFQNRGGGSGGGGNYRGGFNRSGGGGYSQNRWGNNNRDNNNS
NNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPARNPPGASTYNKNSNIPGSSA
NTSTPTVSSYSPPQTYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQ
GGTSTQ"
BASE COUNT 720 a 878 c 821 g 528 t
ORIGIN
1 cagagccctg ggaggccggg ccgggctcgg gggccacccc gggggcccgg gccatggatg
61 tgcgccgtct gaaggtgaac gaacttcgcg aggagctgca gcgccgcggc ctggacactc
121 gaggcctcaa ggccgagctt gctgagcggc tgcaggcggc gttggaggcc gaggagcctg
181 acgacgagcg ggagctcgac gccgacgacg aaccggggcg acccgggcac atcaacgagg
241 aggtcgagac cgaggggggc tccgagctgg aggggaccgc gcagccaccg ccgcccgggc
301 tgcagccgca cgcggagccc ggcggctact cggggccgga cggacattat gccatggaca
361 atattaccag gcagaaccaa ttctacgata cccaagtcat caaacaagaa aacgagtcag
421 gctacgagag gagaccactg gaaatggagc agcagcaggc ctatcgtcca gaaatgaaga
481 cagagatgaa gcaaggagca cccaccagct tcctcccgcc tgaagcttct caactcaagc
541 cagacaggca gcaattccag agtcgaaaga ggccttatga agaaaaccgg ggacgggggt
601 actttgagca ccgagaggat aggaggggcc gctctcctca gcctcctgct gaagaggatg
661 aagatgactt tgatgatacc cttgttgcta ttgacaccta taactgcgac ctccacttca
721 aggtggcccg agatcggagt agtggctatc cgctcacaat tgagggcttt gcatacctgt
781 ggtcaggagc ccgtgccagc tatggggtca gaaggggccg tgtatgcttc gagatgaaga
841 tcaatgagga aatctccgtg aagcaccttc cgtctacaga gcctgacccc cacgtggtcc
901 gtatcggctg gtccctggac tcctgcagca cccagctagg cgaagagcct ttctcctatg
961 gctatggagg cactgggaag aagtccacca atagccggtt tgaaaactac ggagacaagt
1021 ttgcagagaa cgatgtgatt ggctgctttg cggattttga atgtggaaat gacgtggaac
1081 tgtcttttac caagaatgga aagtggatgg gcattgcttt ccgaatccag aaggaagcct
1141 tggggggtca ggccctctat cctcatgtcc tggtgaagaa ttgcgcagtg gagttcaact
1201 tcggacagag agcagagccc tactgttctg tcctcccggg gtttaccttc atccagcacc
1261 ttccccttag tgagcgtatc cggggcaccg ttggaccaaa gagcaaggca gaatgtgaga
1321 ttctgatgat ggtgggcctg cctgctgctg gcaagaccac atgggccatc aaacatgcag
1381 cctccaaccc ttccaagaag tacaacatcc tgggtaccaa tgccatcatg gataagatgc
1441 gggtgatggg cctacgccgg cagcggaact atgctggccg ctgggatgtc ctgatccagc
1501 aggccaccca gtgcctcaac cgcctcatcc agattgctgc ccgcaagaaa cgcaactata
1561 tcctagatca gacaaatgtt tatgggtcag cccagagacg aaaaatgaga ccatttgaag
1621 gcttccagcg caaagctatt gtaatttgtc ccactgacga ggacctaaaa gaccgaacaa
1681 taaagcgaac cgacgaggaa gggaaggatg tcccagatca tgcggtctta gaaatgaaag
1741 ccaacttcac gttgccagat gttggggact tcctggatga ggttctgttc attgagctgc
1801 agcgggagga agcggacaag ctagtgaggc agtacaacga ggaaggccgc aaggctgggc
1861 caccccctga aaagcgcttt gacaaccgag gtggtggtgg cttccggggc cgcgggggtg
1921 gtggtggctt ccagcgctat gaaaaccgag gaccccctgg aggcaaccgt ggcggcttcc
1981 agaaccgagg gggaggcagc ggtggaggag gcaactaccg aggaggtttc aaccgcagcg
2041 gaggtggtgg ctatagccag aaccgctggg gtaacaacaa ccgggataac aacaactcca
2101 acaacagagg cagctacaac cgggctcccc agcaacagcc gccgccacag cagcctccgc
2161 caccacagcc accaccccag cagccaccgc caccacccag ctacagccct gctcggaacc
2221 ccccaggggc cagcacctac aataagaaca gcaacatccc tggctcaagc gccaatacca
2281 gcacccccac cgtcagcagc tacagccctc cacagaccta ccctcagccc agctataacc
2341 agtatcagca gtatgcccag cagtggaacc agtactatca gaaccagggc cagtggccgc
2401 catactacgg gaactacgac tacgggagct actccgggaa cacacagggt ggcacaagta
2461 cacagtagcc agtgtgaccc agaggctccc ggaggcccct gccggcttcc tccaccagcg
2521 cctgcctcgg cccctcctct gcccccgcca gatcccgtgg tgctggggat ggggtcatcc
2581 cagggctgcc tccctccagc ccactgcctc ccctctgagg ggcttccttc ccctccatag
2641 ggccaggcat ttttttctgg attcaaacag gcaacaatga ccttttattt tctgtttgtc
2701 cccacctccc cagccttcca cctcctgttc ttcctacctt cttccttttt gactaaataa
2761 tccccacctc ccttgatcat acagtgaggc tacagtgact gaggggagaa tcccctcctg
2821 ttcactctcc caaccctgct ccagcccctc agcttcccag accctcatgc agttggttgt
2881 aaattctccc aggagctgtt ttactgtcta cttttcagga ttaaaaaaaa aaaaaaaaaa
2941 aaaaaaa
//