LOCUS BC027624 2412 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens Bardet-Biedl syndrome 4, mRNA (cDNA clone MGC:33591 IMAGE:4824276), complete cds. ACCESSION BC027624 VERSION BC027624.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2412) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2412) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC027624.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 46 Row: l Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 25952121. FEATURES Location/Qualifiers source 1..2412 /db_xref="H-InvDB:HIT000040297" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:33591 IMAGE:4824276" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2412 /gene="BBS4" /db_xref="GeneID:585" /db_xref="HGNC:HGNC:969" /db_xref="MIM:600374" CDS 20..1579 /gene="BBS4" /codon_start=1 /product="Bardet-Biedl syndrome 4" /protein_id="AAH27624.1" /db_xref="GeneID:585" /db_xref="HGNC:HGNC:969" /db_xref="MIM:600374" /translation="MAEERVATRTQFPVSTESQKPRQKKAPEFPILEKQNWLIHLHYI RKDYEACKAVIKEQLQETQGLCEYAIYVQALIFRLEGNIQESLELFQTCAVLSPQSAD NLKQVARSLFLLGKHKAAIEVYNEAAKLNQKDWEISHNLGVCYIYLKQFNKAQDQLHN ALNLNRHDLTYIMLGKIHLLEGDLDKAIEVYKKAVEFSPENTELLTTLGLLYLQLGIY QKAFEHLGNALTYDPTNYKAILAAGSMMQTHGDFDVALTKYRVVACAVPESPPLWNNI GMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQ PKMGELYMLLAVALTNLEDTENAKRAYAEAVHLDKCNPLVNLNYAVLLYNQGEKKNAL VQYQEMEKKVSLLKDNSSLEFDSEMVEMAQKLGAALQVGEALVWTKPVKDPKSKHQTT STSKPASFQQPLGSNQALGQAMSSAAAYRTLPSGAGGTSQFTKPPSLPLEPEPAVESS PTETSEQIREK" BASE COUNT 738 a 532 c 561 g 581 t ORIGIN 1 ggcggtgggc tgagctaaaa tggctgagga gagagtcgcg acgagaactc aatttcctgt 61 atctactgag tctcaaaaac cccggcagaa aaaagctcca gagtttccta ttttggagaa 121 gcagaactgg ttgattcatc ttcattatat ccggaaagat tatgaagcct gcaaggctgt 181 tatcaaagaa cagcttcaag agactcaggg attgtgtgaa tatgctatct atgtccaagc 241 attgatattt cgcctagaag gaaatatcca agaatcccta gaactcttcc agacatgtgc 301 agttcttagt cctcagagtg ctgataacct caagcaggtg gccagatctt tatttctttt 361 gggaaaacat aaagctgcca ttgaagtata taatgaagca gctaaactca accagaaaga 421 ttgggagatc agccataacc taggagtttg ctacatatac ctgaagcagt tcaacaaggc 481 acaagaccag ttgcacaatg ccctgaatct taataggcac gatctgactt atataatgct 541 ggggaagatc cacttgctgg agggagactt ggacaaggcc attgaagtct acaagaaagc 601 agtggagttc tcaccagaaa atacagagct tcttacaact ttaggattac tctacttaca 661 gctcggcatt taccagaagg catttgaaca tcttggcaat gcactgactt atgaccctac 721 caactacaag gccatcttgg cagcaggcag catgatgcag acccacgggg actttgatgt 781 tgccctcacc aaatacagag ttgtggcttg tgctgttcca gaaagtcctc cactctggaa 841 taacattgga atgtgtttct ttggcaagaa gaaatatgtg gcggccatca gctgcctgaa 901 acgagccaac tacttggcac ccttcgattg gaagattctg tataatttgg gccttgtcca 961 tttgaccatg cagcagtatg catcagcttt tcattttctc agtgcggcca tcaacttcca 1021 gccaaagatg ggggagctct acatgctctt ggcagtggct ctgaccaatc tggaagatac 1081 agaaaatgcc aagagagcct acgcagaagc agtccacctg gataagtgta accctttagt 1141 aaacctgaac tatgctgtgc tgctgtacaa ccagggcgag aagaagaacg ccctggtcca 1201 atatcaggag atggagaaga aagtcagcct actcaaggac aatagctctc tggaatttga 1261 ctctgagatg gtggagatgg ctcagaagtt gggagctgct ctccaggttg gggaggcact 1321 ggtctggacc aaaccagtta aagatcccaa atcaaagcac cagaccactt caaccagcaa 1381 acctgccagt ttccagcagc ctctgggctc taatcaagct ctaggacagg caatgtcttc 1441 agcagctgca tacaggacgc tcccctcagg tgctggagga acatcccagt tcacaaagcc 1501 cccatctctt cctctggagc cagagcctgc ggtggaatca agtccaactg aaacatcaga 1561 acaaataaga gagaaataag aatagaatga atgaccccaa aatagggttt tcttgggcga 1621 ggatgtgctg gattaggaaa ggtgacatga cacaggcaga gcagagtggc acccaccaca 1681 gaatacagtg tgtgttatta cgaggagcca gcagttgagc ctaaggtcct tctacctacc 1741 tggtattggc atttgaggtc ggaaaccctc tactgcccca taagccagga aaagtgaaaa 1801 gagaacacag ttcctttaag aactggcagc aaggcttgag gccttatgta tgtagctgag 1861 tcagcaaggt acatgatgct gtctgctttc aaaaggactt ttctctccta gctgactgac 1921 tccttcctta gttcaaggaa cagctgagac agacctctgc tgagtagctc tgtgatgaca 1981 aagccttggt ttaactgagg tgatcctcag gttgtgaggt ttattagtcc ccaaggcaaa 2041 cacaaatatt agattaataa tccaacttta atagtataca tttaaaagaa aaaaaacaaa 2101 agccctggaa gttgaggcca agcctgctga gtattgcagc tgcatttgcc caaagggaat 2161 ccagaacaag tccctccctg tattttgttc ttgagagggg tcagtctaga agctagatcc 2221 tatcaggatg aggagcagca gcccagggct tgtctggatc agcaccaacg attttaaaga 2281 aaaaaggaag agtttcttag atgagtaatt gttattgaag atagtcagtg ataaccactg 2341 accagatgct atcaatacac tatgtgtcct ttttagaata aagattacat atcatcgaaa 2401 aaaaaaaaaa aa //