LOCUS BC027033 3356 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens GA binding protein transcription factor, beta subunit
2, mRNA (cDNA clone MGC:29891 IMAGE:5139830), complete cds.
ACCESSION BC027033
VERSION BC027033.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3356)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3356)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 42 Row: p Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389426.
FEATURES Location/Qualifiers
source 1..3356
/db_xref="H-InvDB:HIT000040241"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29891 IMAGE:5139830"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3356
/gene="GABPB2"
/gene_synonym="RP11-68I18.1"
/db_xref="GeneID:126626"
/db_xref="HGNC:HGNC:28441"
CDS 332..1678
/gene="GABPB2"
/gene_synonym="RP11-68I18.1"
/codon_start=1
/product="GA binding protein transcription factor, beta
subunit 2"
/protein_id="AAH27033.1"
/db_xref="GeneID:126626"
/db_xref="HGNC:HGNC:28441"
/translation="MSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHL
AAQYGHYSTAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDM
LKMTALHWATERHHRDVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAM
QNQVNVNPERANPVTDPVSMAAPFIFTSGEVVNLASLISSTNTKTTSGDPHASTVQFS
NSTTSVLATLAALAEASVPLSNSHRATANTEEIIEGNSVDSSIQQVMGSGGQRVITIV
TDGVPLGNIQTSIPTGGIGQPFIVTVQDGQQVLTVPAGKVAEETVIKEEEEEKLPLTK
KPRIGEKTNSVEESKEGNERELLQQQLQEANRRAQEYRHQLLKKEQEAEQYRLKLEAI
ARQQPNGVDFTMVEEVAEVDAVVVTEGELEERETKVTGSAGTTEPHTRVSMATVSS"
BASE COUNT 1010 a 748 c 834 g 764 t
ORIGIN
1 gcacttttcc acctcagaag tgcctcagca gaaaggcgat gaacctcggg ggtgcatcat
61 ctttctgtta gaatgggagc atgagttttc tgatcatttt cccttcacag attcctccgc
121 cagaaatctt actcgcggcg ccttcatttc cgggtccgcc attttgttgc ctctgtttct
181 ccacgagggg gggttaaagg cccccaaaac atgcacacat gaaaagggca aaaagtaacc
241 gtccttgaca gggagtctta actagagaag gaaacgggac taaactggcg ggctccgtgg
301 aagcgtggcc ggcagcgtcc cggacgagga gatgtctttg gtggacttgg gaaagaggtt
361 gctagaagca gcaagaaaag gccaagatga tgaagtgaga acgttgatgg caaatggcgc
421 cccattcacc acagactggc ttggaacatc acccctccac cttgcagctc aatatggtca
481 ttattccaca gcagaagtac tccttcgagc aggtgttagc agggatgccc ggactaaagt
541 agacaggacc cccttgcaca tggctgcagc cgatggacat gcgcacatcg tggaactgct
601 tgttcggaat ggtgcagatg tgaatgccaa ggacatgctg aagatgacag ctttgcattg
661 ggccacagag cgccaccatc gagatgtcgt agagttactt atcaaatatg gagctgatgt
721 ccatgctttc agcaaatttg ataaatcagc ctttgacata gctctggaga aaaacaatgc
781 tgagattttg gtcatcctcc aggaagcaat gcagaatcag gtgaatgtta atccagagag
841 agccaaccct gtgactgacc ctgtgagtat ggctgctcca ttcatcttca cgtcgggtga
901 ggttgttaac ctcgcaagcc ttatttcttc aaccaacacc aaaacaacct caggtgaccc
961 ccatgcctca acagtacagt tttcaaattc taccacctca gtgctggcta cccttgcagc
1021 tcttgctgag gcatcagtcc ccctctccaa ctcacacaga gccacagcca atacagagga
1081 aattatagaa ggaaattccg ttgactcatc aatccagcaa gtaatgggga gtggaggcca
1141 gagggtcatc accatagtga ctgatggagt ccctctgggt aatatccaaa cttcaatccc
1201 tactggaggc attggccagc catttattgt aactgtgcaa gatggacagc aagttctaac
1261 tgtacctgct ggtaaggttg cagaggagac tgtaattaaa gaggaagaag aagagaagtt
1321 gccactaaca aagaaaccaa ggataggaga gaagacaaac agtgtggagg aaagcaagga
1381 aggcaatgaa agagagctac tacagcaaca actccaggag gccaatcgaa gagcccagga
1441 ataccgacac cagctcctaa agaaagagca ggaagcagaa cagtaccgtc ttaagctgga
1501 ggccatagcc cgacagcagc ccaatggagt tgatttcacc atggttgaag aggtggctga
1561 ggtagatgct gtagtagtca cagaggggga gttggaagag agagagacaa aagtgactgg
1621 gtcagcaggg accacagagc ctcacactag agtttccatg gcaactgttt catcttaata
1681 tgcaagggcc acaatttgca ctgtgttcat attaatcctc ttttaaaaaa ggaaatatac
1741 agaagacaaa cattgtataa aaactaagag tgtctttaag aagaaaacta tagcagggta
1801 caatgcttgg gctcaggaag tttctctgtg caactagaaa attcaaagcc atatttaggg
1861 aacatttttt ctgaggggcc aaaagaataa aggaccaaat ttcttagctc atatcattgc
1921 tttaaacata gaagtaaaag aatactgcat gttgtgggtt gatttttttt tttaaataac
1981 tgactttctc acaaaagatt ttaagataac atttctaata tatatgcacc aatatatatg
2041 cctttaataa ttataccatc aagtgacctg aaaatgcccc ttagatttat gatgcgtatc
2101 tgttggaaaa accaattgga agggaagtta gacaagcttt ggggaagaga aaaggaatat
2161 agtccatttc caaaggagca ggaactccca accttaagtt aatttcactg aagagaattt
2221 tccctttttt tttttttttt tgagacacgg tctgactctg tcacccaggc tggagtgcgg
2281 tggtgcaatc ttggctcact gcaacctccg cctccagggc gcagcctcct gagtagctgg
2341 gaggacaggc atatgccacc acatcactga gaagaaattt ttgattgtct gacagatact
2401 tatccattat gtgtctatag ttcagatgct tgtgtaagaa actgaaataa gctgcgtgtg
2461 gtggctcaca cctgtaatcc caacactttg ggacgttgaa atgggagaat tgcttgagtc
2521 caggagtttg agatgcgcct gggcaacata gaaacctgtg tctacaaaaa atttaaaaat
2581 tagccaagta tggtgacagg cacctatggt tccagctact caggaggctg aggtgggagg
2641 atcgcttgtg ccttggaggt caaaactgca gtgagccatg gttgcaccac tgctctccag
2701 gcttgagtga cagagcaaga ctgtatctca aaggaaaaag gaaactaggc caggcgtggt
2761 ggctcacgcc tgtagtccca acactttggg aggccgaggc gggcggatca cgaggtcaga
2821 tcaagaacat cctggctaac acggtgaaac tccatctcta ctaaaaatac aaaaaattgg
2881 ccgggcgcag cggctcacgc ctgtaatccc agcactttcg gaggcagagg caggcggatc
2941 acaaggtcaa gagattaaga tcatcctggc caacatggtg acaccccgtc tctactaaaa
3001 atacaaaaat tacccaggca tagtggcaca cgcctgtagt cccagttact tgggaggctg
3061 aggcaggaga attgcttgaa cctgggaggt ggaggttgca gtgagccaag atcgtgccac
3121 tgcactccag cctggcgaca cagtgagact ctgtctcaaa aaaacaaaac aaacaaacaa
3181 aaatacaaaa aattagccgg gcgtggtggc acctgcctgt aatcccagct acttgggagg
3241 ctgaggcagg agaatcgctt gaacccggga ggcggaggtt gcagtgagct gagatcgcac
3301 cattacactc cagcctgggc aacagagcca gactctgtct caaaaaaaaa aaaaaa
//