LOCUS BC026951 3925 bp mRNA linear HUM 12-JAN-2007
DEFINITION Homo sapiens KIAA0196, mRNA (cDNA clone MGC:8744 IMAGE:3882443),
complete cds.
ACCESSION BC026951
VERSION BC026951.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3925)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3925)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 21 Row: o Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41281517.
FEATURES Location/Qualifiers
source 1..3925
/db_xref="H-InvDB:HIT000040235"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8744 IMAGE:3882443"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3925
/gene="KIAA0196"
/db_xref="GeneID:9897"
/db_xref="HGNC:HGNC:28984"
/db_xref="MIM:610657"
CDS 81..3560
/gene="KIAA0196"
/codon_start=1
/product="KIAA0196"
/protein_id="AAH26951.1"
/db_xref="GeneID:9897"
/db_xref="HGNC:HGNC:28984"
/db_xref="MIM:610657"
/translation="MLDFLAENNLCGQAILRIVSCGNAIIAELLRLSEFIPAVFRLKD
RADQQKYGDIIFDFSYFKGPELWESKLDAKPELQDLDEEFRENNIEIVTRFYLAFQSV
HKYIVDLNRYLDDLNEGVYIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGE
VRERMLVSYYRYSAARSSADSNMDDICKLLRSTGYSSQPGAKRPSNYPESYFQRVPIN
ESFISMVIGRRRSDDIYNQVSAYPLPEHRSTALANQAAMLYVILYFEPSILHTHQAKM
REIVDKYFPDNWVISIYMGITVNLVDAWEPYKAAKTALNNTLDLSNVREQASRYATVS
ERVHAQVQQFLKEGYLREEMVLDNIPKLLNCLRDCNVAIRWLMLHTADSACDPNNKRL
RQIKDQILTDSRYNPRILFQLLLDTAQFEFILKEMFKQMLSEKQTKWEHYKKEGSERM
TELADVFSGVKPLTRVEKNENLQAWFREISKQILSLNYDDSTAAGRKTVQLIQALEEV
QEFHQLESNLQVCQFLADTRKFLHQMIRTINIKEEVLITMQIVGDLSFAWQLIDSFTS
IMQESIRVNPSMVTKLRATFLKLASALDLPLLRINQANSPDLLSVSQYYSGELVSYVR
KVLQIIPESMFTSLLKIIKLQTHDIIEVPTRLDKDKLRDYAQLGPRYEVAKLTHAISI
FTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAFALHRGLIFNPRAKPSELMPK
LKELGATMDGFHRSFEYIQDYVNIYGLKIWQEEVSRIINYNVEQECNNFLRTKIQDWQ
SMYQSTHIPIPKFTPVDESVTFIGRLCREILRITDPKMTCHIDQLNTWYDMKTHQEVT
SSRLFSEIQTTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKIILRDRTVQDTLKTLMN
AVSPLKSIVANSNKIYFSAIAKTQKIWTAYLEAIMKVGQMQILRQQIANELNYSCRFD
SKHLAAALENLNKALLADIEAHYQDPSLPYPKEDNTLLYEITAYLEAAGIHNPLNKIY
ITTKRLPYFPIVNFLFLIAQLPKLQYNKNLGMVCRKPTDPVDWPPLVLGLLTLLKQFH
SRYTEQFLALIGQFICSTVEQCTSQKIPEIPADVVGALLFLEDYVRYTKLPRRVAEAH
VPNFIFDEFRTVL"
BASE COUNT 1210 a 828 c 801 g 1086 t
ORIGIN
1 ctaataatat acagacacca gctctgaggc cagttaatca tccccagtgt ccaggcacag
61 agtagtcggt ccgcctcaca atgttggact ttctagctga gaacaacctc tgtggccaag
121 caatcctaag gattgtttcc tgtggtaatg ccatcattgc tgaacttttg agactctctg
181 agtttattcc tgctgtgttc aggttaaaag acagagctga tcaacagaaa tatggagata
241 tcatatttga tttcagctat tttaagggtc cagaattatg ggaaagcaaa ctggatgcta
301 agccagagct acaggattta gatgaagaat ttcgtgaaaa caacatagaa attgtgacca
361 gattttattt agcatttcaa agtgtacata aatatattgt agacttaaac agatatctag
421 atgatctcaa tgaaggggtt tatattcagc aaaccttaga aactgtgctt ctcaatgaag
481 atggaaaaca acttctatgt gaagcactgt acttatatgg agttatgcta ctggtcattg
541 accaaaagat tgaaggagaa gtcagagaga ggatgctggt ttcttactac cgatacagtg
601 ctgctcgatc ttctgctgat tcaaatatgg acgatatttg taagctgctt cgaagtacag
661 gttattctag ccaaccaggt gccaaaagac catccaacta tcccgagagc tatttccaga
721 gagtgcctat caacgaatcc ttcatcagta tggtcattgg tcgacggaga tctgatgata
781 tttacaacca ggtctcagcg tatcctttgc cggagcatcg cagcacagcc ctggcaaacc
841 aagctgccat gctgtacgtg attctctact ttgagccttc catccttcac acccatcaag
901 caaaaatgag agagatagtg gataaatact ttccagataa ttgggtaatt agtatttaca
961 tggggatcac agttaatcta gtagatgctt gggaacctta caaagctgca aaaactgctt
1021 taaataatac cctggacctt tcaaatgtca gagaacaggc aagcagatat gctactgtca
1081 gtgaaagagt gcatgctcaa gtgcagcaat ttctaaaaga aggttattta agggaggaga
1141 tggttctgga caatatccca aagcttctga actgcctgag agactgcaat gttgccatcc
1201 gatggctgat gcttcataca gcagactcag cctgtgaccc aaacaacaaa cgccttcgtc
1261 aaatcaagga ccagattcta acagactctc ggtacaatcc caggatcctc ttccagctgc
1321 tgttagatac tgcacaattt gagtttatac tcaaagagat gttcaagcaa atgctttcag
1381 aaaagcaaac caaatgggag cattacaaga aagagggttc ggagcggatg actgagcttg
1441 ctgatgtctt ttcaggagtg aaacccctaa ccagagtgga gaaaaatgaa aaccttcaag
1501 cttggttcag agagatctca aaacaaatat tgtctttaaa ttatgatgat tctactgctg
1561 cgggcagaaa aactgtacaa ctgatacaag ctttggaaga ggttcaagaa ttccaccagt
1621 tggaatccaa tctgcaagta tgtcagtttc ttgccgatac tcgaaagttt cttcatcaaa
1681 tgatcagaac cattaacatt aaagaggagg ttctgatcac aatgcagatc gttggggacc
1741 tttctttcgc ttggcagttg attgacagtt tcacatccat catgcaagaa agcataaggg
1801 taaatccatc catggttact aaactcagag ctaccttcct aaagcttgcc tctgccctcg
1861 atctgcccct tcttcgtatt aatcaggcaa atagccccga cctgctcagc gtgtcacagt
1921 actattctgg agagttggta tcctatgtga gaaaagtttt gcagatcatc ccagaaagca
1981 tgtttacatc tcttctaaag atcataaagc ttcagaccca cgacattatt gaagtgccta
2041 cccgcctgga caaagacaag ctgagggact atgctcagct aggcccacga tacgaggttg
2101 ccaagcttac tcatgctatt tccattttta ctgaaggcat cttaatgatg aaaacgactt
2161 tggttggcat catcaaggtg gatccaaagc agttgctgga agatggaata aggaaagagc
2221 ttgtgaagcg cgttgccttt gccctgcata ggggactgat attcaaccct cgagccaagc
2281 caagtgaatt gatgcccaag ctgaaagagt tgggagcgac catggatgga ttccatcgtt
2341 cttttgaata catacaggac tatgtcaaca tttatggtct gaagatttgg caggaagaag
2401 tatctcgtat cataaattac aacgtggagc aagagtgtaa taactttcta agaacgaaga
2461 ttcaagattg gcaaagcatg taccagtcca ctcatattcc aatacccaag tttacccctg
2521 tggatgagtc tgtaacgttt attggtcgac tctgcagaga aatcctgcgg atcacagacc
2581 caaaaatgac atgtcacata gaccagctga acacttggta tgatatgaaa actcatcagg
2641 aagtgaccag cagccgcctc ttctcagaaa tccagaccac cttgggaacc tttggtctaa
2701 atggcttaga caggcttctg tgctttatga ttgtaaaaga gttacagaat ttcctcagta
2761 tgtttcagaa aattatcctg agagacagaa ctgttcagga cactttaaaa accctcatga
2821 atgctgtcag tcccctaaaa agtattgtcg caaattcaaa taaaatttat ttttccgcca
2881 ttgccaaaac acagaagatt tggactgcgt atctcgaggc tataatgaag gttgggcaga
2941 tgcagattct gagacaacag attgccaatg aattaaatta ttcttgtcgg tttgattcta
3001 aacatctggc agctgctctg gagaatctca ataaggctct cctagcagac attgaagccc
3061 actatcagga cccttcactt ccttacccca aagaagataa cacactttta tatgaaatca
3121 cagcctatct ggaggcagct ggcattcaca acccactgaa taagatatac ataacaacaa
3181 agcgcttacc ctattttcca attgtaaact ttctattttt gatcgctcag ttgccaaaac
3241 ttcaatacaa caaaaatctg ggaatggtct gccgaaaacc gaccgacccg gttgattggc
3301 caccacttgt cctgggactg ctcactctgc tgaagcagtt ccattcccgg tacaccgagc
3361 agttcctggc gctgattggc cagtttatct gctccacggt ggagcagtgt acaagccaga
3421 agatacctga aattcctgca gatgttgtgg gtgcccttct gttcctggag gattatgttc
3481 ggtacacaaa gctacccagg agggttgctg aagcacatgt gcctaatttc atttttgatg
3541 agttcagaac agtgctgtaa ctgtttttcc tacttcttca atggaaggat tgtccttaga
3601 tcttcccacc atcacaaatg aatttgaaga tgaaaagaaa ctcagttgct catacaactg
3661 cattttttct gtctattatg ggaaacatca gacgttctga gtaagatata tctcatggca
3721 ttagttaata taactgatat tgtttaaatc atggtattac atgcaattta tatcagataa
3781 aagcagaaca catttttgta ctgcctctct taaatgctga atgtaactgt tatgtataaa
3841 tccatttagt tttatgttct aaagaactat ttgtgcaact ccagattttc agtaaaatag
3901 tattactagt aaaaaaaaaa aaaaa
//