LOCUS BC026916 1403 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone
MGC:25048 IMAGE:4477452), complete cds.
ACCESSION BC026916
VERSION BC026916.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1403)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1403)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 29 Row: d Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 66346684.
FEATURES Location/Qualifiers
source 1..1403
/db_xref="H-InvDB:HIT000040233"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:25048 IMAGE:4477452"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_91"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1403
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
CDS 73..1299
/gene="SERBP1"
/gene_synonym="CGI-55"
/gene_synonym="CHD3IP"
/gene_synonym="DKFZp564M2423"
/gene_synonym="HABP4L"
/gene_synonym="PAI-RBP1"
/gene_synonym="PAIRBP1"
/codon_start=1
/product="SERPINE1 mRNA binding protein 1"
/protein_id="AAH26916.1"
/db_xref="GeneID:26135"
/db_xref="HGNC:HGNC:17860"
/db_xref="MIM:607378"
/translation="MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGG
GVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALK
KEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDR
PIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGG
SGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENE
VEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAH
AEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSS
ASAPDVDDPEAFPALA"
BASE COUNT 427 a 298 c 415 g 263 t
ORIGIN
1 gctgaagcag gcgctcttgg ctcggcgcgg cccgctgcaa tccgtggagg aacgcgccgc
61 cgagccacca tcatgcctgg gcacttacag gaaggcttcg gctgcgtggt caccaaccga
121 ttcgaccagt tatttgacga cgaatcggac cccttcgagg tgctgaaggc agcagagaac
181 aagaaaaaag aagccggcgg gggcggcgtt gggggccctg gggccaagag cgcagctcag
241 gccgcggccc agaccaactc caacgcggca ggcaaacagc tgcgcaagga gtcccagaaa
301 gaccgcaaga acccgctgcc ccccagcgtt ggcgtggttg acaagaaaga ggagacgcag
361 ccgcccgtgg cgcttaagaa agaaggaata agacgagttg gaagaagacc tgatcaacaa
421 cttcagggtg aagggaaaat aattgataga agaccagaaa ggcgaccacc tcgtgaacga
481 agattcgaaa agccacttga agaaaagggt gaaggaggcg aattttcagt tgatagaccg
541 attattgacc gacctattcg aggtcgtggt ggtcttggaa gaggtcgagg gggccgtgga
601 cgtggaatgg gccgaggaga tggatttgat tctcgtggca aacgtgaatt tgataggcat
661 agtggaagtg atagatcttc tttttcacat tacagtggcc tgaagcacga ggacaaacgt
721 ggaggtagcg gatctcacaa ctggggaact gtcaaagacg aattaacaga gtcccccaaa
781 tacattcaga aacaaatatc ttataattac agtgacttgg atcaatcaaa tgtgactgag
841 gaaacacctg aaggtgaaga acatcatcca gtggcagaca ctgaaaataa ggagaatgaa
901 gttgaagagg taaaagagga gggtccaaaa gagatgactt tggatgagtg gaaggctatt
961 caaaataagg accgggcaaa agtagaattt aatatccgaa aaccaaatga aggtgctgat
1021 gggcagtgga agaagggatt tgttcttcat aaatcaaaga gtgaagaggc tcatgctgaa
1081 gattcggtta tggaccatca tttccggaag ccagcaaatg atataacgtc tcagctggag
1141 atcaattttg gagaccttgg ccgcccagga cgtggcggca ggggaggacg aggtggacgt
1201 gggcgtggtg ggcgcccaaa ccgtggcagc aggaccgaca agtcaagtgc ttctgctcct
1261 gatgtggatg acccagaggc attcccagct ctggcttaac tggatgccat aagacaaccc
1321 tggttccttt gtgaaccctt ctgttcaaag cttttgcatg cttaaggatt ccaaacgact
1381 aagaaattaa aaaaaaaaaa aaa
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