LOCUS BC026884 2099 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chromosome 9 open reading frame 43, mRNA (cDNA clone MGC:17358 IMAGE:3455891), complete cds. ACCESSION BC026884 VERSION BC026884.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2099) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2099) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 19 Row: b Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 22749538. FEATURES Location/Qualifiers source 1..2099 /db_xref="H-InvDB:HIT000040227" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:17358 IMAGE:3455891" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2099 /gene="C9orf43" /gene_synonym="MGC17358" /db_xref="GeneID:257169" /db_xref="HGNC:HGNC:23570" CDS 447..1832 /gene="C9orf43" /gene_synonym="MGC17358" /codon_start=1 /product="chromosome 9 open reading frame 43" /protein_id="AAH26884.1" /db_xref="GeneID:257169" /db_xref="HGNC:HGNC:23570" /translation="MDLPDESQWDETTCGLAVCQHPQCWATIRRIERGHPRILGSSCK TPLDAEDKLPVLTVVDILDSGFAAHHLPECTFTKAHSLLSQSSKFYSKFHGRPPKGLP DKSLINCTNRLPKFPVLNLNETQLPCPEDVRNMVVLWIPEETEIHVSQHGKKKRKNSA VKSKSFLGLSGNQSAGTRVGTPGMIVPPPTPVQLSEQFSSDFLPLWAQSEALPQDLLK ELLPGGKQTMLCPEMKIKLAMMKKNLPLEKNRPDSVISSKMFLSIHRLTLERPALRYP ERLKKLHNLKTEGYRKQQQRQQQQQQQQKKVKTPIKKQEAKKKAKSDPGIQSTSHKHP VTTVHDRLYGYRTLPGQNSDMKQQQQMEKGTTSKQDSTERPKMNYYDHADFHHSVKSP ELYETEPTNKDISAPVDAVPEAQAARQKKISFNFSEIMASTGWNSELKLLRILQDTDD EDEEDQSSGAE" BASE COUNT 627 a 487 c 486 g 499 t ORIGIN 1 cctttaggac ccgaggcagg ctctgggccc gccgggtccg ttaatctcac cgcgccgcaa 61 ggggccacgt tttaccactt gatttagcaa ccctaagcgg tttggaatct gctttgctct 121 cacaggacct cagcccgtcg tgatcagatt ctcccacttt cttttttctt tcctggaatg 181 gagtgggcag tctttttcca tctctaccga agttgatgtt catttttaat cttttcgccc 241 ctcacgcttt tgtaataatg gtactaagac tgagtgttat ttagatttta ttgttgttgt 301 ttgtgtttaa cgcgaactat ttaggcagcc cagggataat gctggccata tagagatgcg 361 cctgattagg tctcaggagt caattcggac tgggcagagc actagaatgc tgcagggttg 421 gcctttggcc taaaccattt ctagctatgg acttgccaga tgagagccag tgggacgaaa 481 ccacctgtgg cttggctgtt tgtcagcacc cacaatgctg ggcaactatc cgccgcattg 541 agaggggcca tcctcgaatc ctcggctcat cctgcaaaac tcccctggat gctgaagata 601 aactcccagt gctcaccgtg gtagacatct tagattccgg ctttgcagct catcatttac 661 cagaatgtac ctttactaag gcccattctt tattgtctca gagttcaaag ttttactcca 721 aatttcatgg caggcctccg aagggtttac ctgacaaaag tttgatcaac tgtactaaca 781 gacttcccaa atttccagtg ttgaatttga atgagacgca acttccctgc cctgaagatg 841 ttagaaatat ggttgtattg tggatcccag aagaaacaga gatacatgtg agccagcatg 901 ggaagaagaa aagaaagaac tcggcagtga aaagcaagtc atttctgggt ctctctggaa 961 atcagtccgc aggaacacga gtaggaacac cagggatgat cgtgcctccc ccaaccccag 1021 tgcaattgtc tgaacaattc agttcagatt tcctacctct ctgggctcaa tccgaagcgt 1081 tacctcagga tctactgaag gaacttttgc caggtggaaa gcaaaccatg ctctgtccag 1141 agatgaagat aaaattggcc atgatgaaaa agaatcttcc cttggaaaag aaccgacctg 1201 acagtgtgat ttcttctaag atgtttctat ctatacaccg cctcaccctg gaaagaccag 1261 cactgcgata tcctgaacgt ttgaagaaat tacataacct gaagacagaa ggttacagga 1321 aacagcagca gcggcagcag cagcagcagc agcaacagaa gaaggtgaaa acacctatta 1381 agaaacagga ggctaaaaag aaagccaaga gtgatccagg gatccagagc acttcacata 1441 aacatccagt taccaccgtt catgaccgtc tctatggtta cagaactctg ccaggtcaga 1501 acagtgacat gaagcagcag cagcagatgg aaaaaggaac cacttcgaaa caggattcca 1561 cggagagacc aaagatgaac tactatgacc atgcggattt ccaccacagt gtaaaaagtc 1621 ctgaattgta tgaaacagaa cccactaaca aggacattag tgctccagtg gacgctgtgc 1681 cagaagccca ggctgccagg caaaagaaga tctcctttaa cttttcagaa attatggcta 1741 gcacaggctg gaactctgag ctcaaactac ttaggattct tcaggacact gatgatgagg 1801 atgaggagga ccagtcctct ggggcagagt gagaagcctc tggaggaata gactgaaggc 1861 atcccctggg gcagccgtgt tccaaagcgg gatggctggt atcctgaggg cagcaacgtt 1921 tcacataagg gcaagaggag aggggcttct gctctctgga gcctttacca gggcctgagc 1981 tctgagctta gggattccat tttctttgtt cacctctact tgcctctaaa ataaatgtag 2041 gagaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //