LOCUS BC026355 3347 bp mRNA linear HUM 30-JAN-2008 DEFINITION Homo sapiens Bardet-Biedl syndrome 10, mRNA (cDNA clone MGC:26830 IMAGE:4817227), complete cds. ACCESSION BC026355 VERSION BC026355.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3347) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3347) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: n Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31377692. FEATURES Location/Qualifiers source 1..3347 /db_xref="H-InvDB:HIT000040216" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26830 IMAGE:4817227" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3347 /gene="BBS10" /db_xref="GeneID:79738" /db_xref="HGNC:HGNC:26291" /db_xref="MIM:610148" CDS 70..2241 /gene="BBS10" /codon_start=1 /product="Bardet-Biedl syndrome 10" /protein_id="AAH26355.2" /db_xref="GeneID:79738" /db_xref="HGNC:HGNC:26291" /db_xref="MIM:610148" /translation="MLSSMAAAGSVKAALQVAEVLEAIVSCCVGPEGRQVLCTKPTGE VLLSRNGGRLLEALHLEHPIARMIVDCVSSHLKKTGDGAKTFIIFLCHLLRGLHAITD REKDPLMCENIQTHGRHWKNCSRWKFISQALLTFQTQILDGIMDQYLSRHFLSIFSSA KERTLCRSSLELLLEAYFCGRVGRNNHKFISQLMCDYFFKCMTCKSGIGVFELVDDHF VELNVGVTGLPVSDSRIIAGLVLQKDFSVYRPADGDMRMVIVTETIQPLFSTSGSEFI LNSEAQFQTSQFWIMEKTKAIMKHLHSQNVKLLISSVKQPDLVSYYAGVNGISVVECL SSEEVSLIRRIIGLSPFVPPQAFSQCEIPNTALVKFCKPLILRSKRYVHLGLISTCAF IPHSIVLCGPVHGLIEQHEDALHGALKMLRQLFKDLDLNYMTQTNDQNGTSSLFIYKN SGESYQAPDPGNGSIQRPYQDTVAENKDALEKTQTYLKVHSNLVIPDVELETYIPYST PTLTPTDTFQTVETLTCLSLERNRLTDYYEPLLKNNSTAYSTRGNRIEISYENLQVTN ITRKGSMLPVSCKLPNMGTSQSYLSSSMPAGCVLPVGGNFDILLHYYLLNYAKKCHQS EETMVSMIIANALLGIPKVLYKSKTGKYSFPHTYIRAVHALQTNQPLVSSQTGLESVM GKYQLLTSVLQCLTKILTIDMVITVKRHPQKVHNQDSEDEL" BASE COUNT 1033 a 603 c 628 g 1083 t ORIGIN 1 gttcccaccc ctgttttcgg tcggcccggg tgttctgcaa gctggtcaaa aaggggaagc 61 ggctcagata tgttaagttc tatggccgct gcagggtctg tgaaggcggc gttgcaggtg 121 gccgaggtgc tggaagccat cgtgagctgc tgcgtggggc ccgagggacg gcaagttttg 181 tgtacgaagc ccactggcga ggtgcttctc agccggaatg gaggccgcct cctggaggcg 241 ctacacttag agcatcccat agccaggatg atagtggact gtgtttccag tcatctcaaa 301 aaaacaggag atggtgcaaa aacatttatt atctttcttt gccatttgct tagaggactt 361 catgcaatca cagacagaga aaaggatcct ttgatgtgtg aaaacattca aacccatgga 421 aggcattgga aaaattgttc tcggtggaaa tttatttccc aggctctcct aacgtttcag 481 acacaaatat tagacggtat tatggaccag tacctaagta gacacttttt gtctatcttt 541 tcgtctgcta aagagagaac attgtgtagg agctctttag agttgctctt agaagcatac 601 ttttgtggaa gagtgggaag aaataatcat aaatttattt cacagttgat gtgtgactac 661 tttttcaagt gtatgacttg taaaagtggg attggtgtat ttgagttagt ggatgaccat 721 tttgtagagt tgaatgttgg tgtcactggc cttcctgttt cagattccag gatcatagct 781 ggtcttgtgc ttcagaaaga tttttctgtg taccgcccag cagatggtga catgcgaatg 841 gtgatagtaa cagaaaccat tcagcctctt ttttccactt ctggatcaga gtttattcta 901 aattcagaag cacagtttca gacatctcaa ttttggatta tggaaaagac aaaagcaata 961 atgaaacatc tacatagtca gaatgtaaaa ttgctcatat ctagtgtgaa acaaccagat 1021 ttagttagtt attatgcagg ggtgaatggc atatcagtgg ttgagtgttt atcatcagaa 1081 gaagtttctc ttatccggag gatcattggt ctttctccat ttgtaccacc acaggccttt 1141 tcgcagtgtg aaatacctaa cactgctttg gtgaaatttt gtaaacctct tatccttaga 1201 tccaaaagat atgttcatct aggcttgata agcacatgtg catttatacc acactctata 1261 gttctttgtg gaccagtgca tggtctcatt gaacaacatg aggatgcttt acatggagca 1321 cttaaaatgc ttcggcaatt atttaaagac cttgatctaa attacatgac acaaaccaat 1381 gaccaaaatg gcacttcaag tctttttatt tataagaaca gtggagaaag ttatcaagca 1441 ccagatccgg gtaatggctc aatacaaagg ccttatcagg acacagttgc agagaacaaa 1501 gatgcattgg aaaaaactca aacatattta aaagtacatt ctaatttggt aattccagat 1561 gtagaattag aaacatatat tccgtattca acccccacac tgacaccaac agatacattc 1621 caaacagttg aaacgctgac atgtttgtct ttggaaagaa acaggctaac tgattattat 1681 gaaccattac tcaagaacaa ttccactgct tattcaacaa ggggaaatag aatagaaatt 1741 tcttacgaaa atttacaggt cacaaatatt actagaaagg gaagcatgtt accagtgagc 1801 tgtaagttac cgaatatggg tacttcccag agttaccttt cctcatctat gccagctggt 1861 tgtgttttgc cagtaggtgg taattttgat atcttgttac attactatct tctcaattat 1921 gccaaaaaat gccatcaatc agaagaaacc atggttagta tgataatagc taatgcactt 1981 ttaggcattc ccaaagtcct ttataaatct aaaacaggaa agtacagctt tccacataca 2041 tatataagag ctgtccatgc actgcaaacc aatcaaccct tggtaagcag tcagacaggt 2101 ttggaatcag taatgggtaa ataccagcta ctaacttcag ttcttcagtg tttgacaaaa 2161 atattaacca ttgacatggt aatcactgtt aagagacacc ctcagaaagt tcacaatcaa 2221 gattcagaag atgaactata acatcagaag tttttaatta accaaacttt tcatctaact 2281 caagccaagt aaagcagtca tgtgaccact ggttctaaag tcagttcagt ctacttagga 2341 aaatagcgta actttaaaag tctttagaag aagcacacta aggtcaccag accagataca 2401 aatattaaat tactttatgg aacaaatcta gaggggaagc caagatttgg ctaagtgtgt 2461 ctgttttttc cctattttat gcctctgtgt ctcagctctg tgttagccta tgtgtttagg 2521 ggagggtttt tctttatagc tcctttttac tctcctgtat ctttttcact ccagccctcc 2581 ttcatcgtta catgtttagt tcatagaatc atttaatctc tgatttgggt gggcttattc 2641 taattgtttt taatattgaa tacattattt gcattaattt tccctactca tactttgtaa 2701 agctgagtaa aaggctcaaa ttattttttt caaaaagcat aaaattaaat tagcagtgag 2761 taaaaggctc aaattttttt tcaaaaagca taaaattaat ttttactttt atgtggtcat 2821 tggtttactg ccacttcatt tggaaaactt ggatagattt tcgcctttga tatacctttg 2881 aatatatgtt acctgaaata taactgtgca ttgttaactc tttcatttct gtagtaaaag 2941 gttaatacta gaaaggatat gcaattaata ctttgatttt ctcctgaccc caagagcttg 3001 taaggatatg tcatgtattt actggttttt cttgtatctg gtgcatagcc agagttccac 3061 agtaacaaat aatttgacaa tttttatttc taatgtttat ttctgtttta tttttaattt 3121 ttatttctaa tttatttcat ttacaaatgt tcatatttta aaaacttgtc aatgtaaata 3181 atatgatgca tcttatcatg gacaaggaca gtgttttcta cctttatcag ttctctgtaa 3241 tacccaaaac agtgctgtat ttactccaag tattcagaag tgcttgttga ataaaacagt 3301 gttatcttta attcattcct ttaaaaaaaa agaaaaaaaa aaaaaaa //