LOCUS BC026329 3000 bp mRNA linear HUM 25-JAN-2007 DEFINITION Homo sapiens gap junction protein, alpha 1, 43kDa, mRNA (cDNA clone MGC:26323 IMAGE:4794131), complete cds. ACCESSION BC026329 VERSION BC026329.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3000) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3000) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 32 Row: d Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4755136. FEATURES Location/Qualifiers source 1..3000 /db_xref="H-InvDB:HIT000040199" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26323 IMAGE:4794131" /tissue_type="Brain, hypothalamus" /clone_lib="NIH_MGC_96" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3000 /gene="GJA1" /gene_synonym="CX43" /gene_synonym="DFNB38" /db_xref="GeneID:2697" /db_xref="HGNC:HGNC:4274" /db_xref="MIM:121014" CDS 89..1237 /gene="GJA1" /gene_synonym="CX43" /gene_synonym="DFNB38" /codon_start=1 /product="gap junction protein, alpha 1, 43kDa" /protein_id="AAH26329.1" /db_xref="GeneID:2697" /db_xref="HGNC:HGNC:4274" /db_xref="MIM:121014" /translation="MGDWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESA WGDEQSAFRCNTQQPGCENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRK EEKLNKKEEELKVAQTDGVNVDMHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISIL FKSIFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLSRPTEKTIFIIFMLVVSL VSLALNIIELFYVFFKGVKDRVKGKSDPYHATSGALSPAKDCGSQKYAYFNGCSSPTA PLSPMSPPGYKLVTGDRNNSSCRNYNKQASEQNWANYSAEQNRMGQAGSTISNSHAQP FDFPDDNQNSKKLAAGHELQPLAIVDQRPSSRASSRASSRPRPDDLEI" BASE COUNT 870 a 572 c 627 g 931 t ORIGIN 1 gccttttcat tttacttcat cctccaagga gttcaatcac ttggcgtgac ttcactactt 61 ttaagcaaaa gagtggtgcc caggcaacat gggtgactgg agcgccttag gcaaactcct 121 tgacaaggtt caagcctact caactgctgg agggaaggtg tggctgtcag tacttttcat 181 tttccgaatc ctgctgctgg ggacagcggt tgagtcagcc tggggagatg agcagtctgc 241 ctttcgttgt aacactcagc aacctggttg tgaaaatgtc tgctatgaca agtctttccc 301 aatctctcat gtgcgcttct gggtcctgca gatcatattt gtgtctgtac ccacactctt 361 gtacctggct catgtgttct atgtgatgcg aaaggaagag aaactgaaca agaaagagga 421 agaactcaag gttgcccaaa ctgatggtgt caatgtggac atgcacttga agcagattga 481 gataaagaag ttcaagtacg gtattgaaga gcatggtaag gtgaaaatgc gaggggggtt 541 gctgcgaacc tacatcatca gtatcctctt caagtctatc tttgaggtgg ccttcttgct 601 gatccagtgg tacatctatg gattcagctt gagtgctgtt tacacttgca aaagagatcc 661 ctgcccacat caggtggact gtttcctctc tcgccccacg gagaaaacca tcttcatcat 721 cttcatgctg gtggtgtcct tggtgtccct ggccttgaat atcattgaac tcttctatgt 781 tttcttcaag ggcgttaagg atcgggttaa gggaaagagc gacccttacc atgcgaccag 841 tggtgcgctg agccctgcca aagactgtgg gtctcaaaaa tatgcttatt tcaatggctg 901 ctcctcacca accgctcccc tctcgcctat gtctcctcct gggtacaagc tggttactgg 961 cgacagaaac aattcttctt gccgcaatta caacaagcaa gcaagtgagc aaaactgggc 1021 taattacagt gcagaacaaa atcgaatggg gcaggcggga agcaccatct ctaactccca 1081 tgcacagcct tttgatttcc ccgatgataa ccagaattca aaaaaactag ctgctggaca 1141 tgaattacag ccactagcca ttgtggacca gcgaccttca agcagagcca gcagtcgtgc 1201 cagcagcaga cctcggcctg atgacctgga gatctagata caggcttgaa agcatcaaga 1261 ttccactcaa ttgtggagaa gaaaaaaggt gctgtagaaa gtgcaccagg tgttaatttt 1321 gatccggtgg aggtggtact caacagcctt attcatgagg cttagaaaac acaaagacat 1381 tagaatacct aggttcactg ggggtgtatg gggtagatgg gtggagaggg aggggataag 1441 agaggtgcat gttggtattt aaagtagtgg attcaaagaa cttagattat aaataagagt 1501 tccattaggt gatacataga taagggcttt ttctccccgc aaacacccct aagaatggtt 1561 ctgtgtatgt gaatgagcgg gtggtaattg tggctaaata tttttgtttt accaagaaac 1621 tgaaataatt ctggccagga ataaatactt cctgaacatc ttaggtcttt tcaacaagaa 1681 aaagacagag gattgtcctt aagtccctgc taaaacattc cattgttaaa atttgcactt 1741 tgaaggtaag ctttctaggc ctgaccctcc aggtgtcaat ggacttgtgc tactatattt 1801 ttttattctt ggtatcagtt taaaattcag acaaggccca cagaataaga ttttccatgc 1861 atttgcaaat acgtatattc tttttccatc cacttgcaca atatcattac catcactttt 1921 tcatcattcc tcagctacta ctcacattca tttaatggtt tctgtaaaca tttttaagac 1981 agttgggatg tcacttaaca tttttttttt gagctaaagt cagggaatca agccatgctt 2041 aatatttaac aatcacttat atgtgtgtcg aagagtttgt tttgtttgtc atgtattggt 2101 acaagcagat acagtataaa ctcacaaaca cagatttgaa aataatgcac atatggtgtt 2161 caaatttgaa cctttctcat ggatttttgt ggtgtgggcc aatatggtgt ttacattata 2221 taattcctgc tgtggcaagt aaagcacact ttttttttct cctaaaatgt ttttccctgt 2281 gtatcctatt atggatactg gttttgttaa ttatgattct ttattttctc tccttttttt 2341 aggatatagc agtaatgcta ttactgaaat gaatttcctt tttctgaaat gtaatcattg 2401 atgcttgaat gatagaattt tagtactgta aacaggcttt agtcattaat gtgagagact 2461 tagaaaaaat gcttagagtg gactattaaa tgtgcctaaa tgaattttgc agtaactggt 2521 attcttgggt tttcctactt aatacacagt aattcagaac ttgtattcta ttatgagttt 2581 agcagtcttt tggagtgacc agcaactttg atgtttgcac taagatttta tttggaatgc 2641 aagagaggtt gaaagaggat tcagtagtac acatacaact aatttatttg aactatatgt 2701 tgaagacatc taccagtttc tccaaatgcc ttttttaaaa ctcatcacag aagattggtg 2761 aaaatgctga gtatgacact tttcttcttg catgcatgtc agctacataa acagttttgt 2821 acaatgaaaa ttactaattt gtttgacatt ccatgttaaa ctacggtcat gttcagcttc 2881 attgcatgta atgtagacct agtccatcag atcatgtgtt ctggagagtg ttctttattc 2941 aataaagttt taatttagta taaacaaaaa aaaaaaaaaa aaaataaaaa aaaaaaaaaa //