LOCUS BC026220 3910 bp mRNA linear HUM 06-JUN-2005
DEFINITION Homo sapiens cullin-associated and neddylation-dissociated 1, mRNA
(cDNA clone IMAGE:3456907), partial cds.
ACCESSION BC026220
VERSION BC026220.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3910)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3910)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC026220.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 20 Row: b Column: 18.
FEATURES Location/Qualifiers
source 1..3910
/db_xref="H-InvDB:HIT000091217"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3456907"
/tissue_type="Cervix, carcinoma"
/clone_lib="NIH_MGC_12"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..3910
/gene="CAND1"
/gene_synonym="KIAA0829"
/gene_synonym="TIP120"
/gene_synonym="TIP120A"
/db_xref="GeneID:55832"
/db_xref="MIM:607727"
CDS <1..3481
/gene="CAND1"
/gene_synonym="KIAA0829"
/gene_synonym="TIP120"
/gene_synonym="TIP120A"
/codon_start=2
/product="CAND1 protein"
/protein_id="AAH26220.1"
/db_xref="GeneID:55832"
/db_xref="MIM:607727"
/translation="LGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIG
ELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFH
PSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTT
RTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKE
VYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSW
KVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQT
RPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVN
VLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALV
PPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAA
DIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAG
SPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLD
ELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALS
AMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACP
KEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPS
EEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKP
YVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLISGSSYARSSV
VTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRD
LLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLD
IFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKA
NSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAAIFESIQK
DSSSTNLESMDTS"
BASE COUNT 1198 a 727 c 794 g 1191 t
ORIGIN
1 tcttggtcct ttagtgagta aagtgaaaga ataccaagta gagacaattg tagataccct
61 ctgcactaac atgctttctg ataaagaaca acttcgagac atttcaagta ttggtcttaa
121 aacagtaatt ggagaacttc ctccagcttc cagtggctct gcattagctg ctaatgtatg
181 taaaaagatt actggacgtc ttacaagtgc aatagcaaaa caggaagatg tctctgttca
241 gctagaagcc ttggatatta tggctgatat gttgagcagg caaggaggac ttcttgttaa
301 tttccatcct tcaattctga cctgtctact tccccagttg accagcccta gacttgcagt
361 gaggaaaaga accattatcg ctcttggcca tctggttatg agctgtggaa atatagtttt
421 tgtagatctt attgaacatc tgttgtcaga gttgtccaaa aatgattcta tgtcaacaac
481 aagaacctac atacaatgta ttgctgctat tagtaggcaa gctggtcata gaataggtga
541 ataccttgag aagataattc ctttggtggt aaaattttgc aatgtagatg atgatgaatt
601 aagagagtac tgtattcaag cctttgaatc atttgtaaga agatgtccta aggaagtata
661 tcctcatgtt tctaccatta taaatatttg tcttaaatat cttacctatg atccaaatta
721 taattacgat gatgaagatg aagatgaaaa tgcaatggat gctgatggtg gtgatgatga
781 tgatcaaggg agtgatgatg aatacagtga tgatgatgac atgagttgga aagtgagacg
841 tgcagctgcg aagtgcttgg atgctgtagt tagcacaagg catgaaatgc ttccagaatt
901 ctacaagacc gtctctcctg cactaatatc cagatttaaa gagcgtgaag agaatgtaaa
961 ggcagatgtt tttcacgcat acctttctct tttgaagcaa actcgtcctg tacaaagttg
1021 gctatgtgac cctgatgcaa tggagcaggg agaaacacct ttaacaatgc ttcagagtca
1081 ggttcccaac attgttaaag ctcttcacaa acagatgaaa gaaaaaagtg tgaagacccg
1141 acagtgttgt tttaacatgt taactgagct ggtaaatgta ttacctgggg ccctaactca
1201 acacattcct gtacttgtac caggaatcat tttctcactg aatgataaat caagctcatc
1261 gaatttgaag atcgatgctt tgtcatgtct atacgtaatc ctctgtaacc attctcctca
1321 agtcttccat cctcacgttc aggctttggt tcctccagtg gtggcttgtg ttggagaccc
1381 attttacaaa attacatctg aagcacttct tgttactcaa cagcttgtca aagtaattcg
1441 tcctttagat cagccttcct cgtttgatgc aactccttat atcaaagatc tatttacctg
1501 taccattaag agattaaaag cagctgacat tgatcaggaa gtcaaggaaa gggctatttc
1561 ctgtatggga caaattattt gcaaccttgg agacaatttg ggttctgact tgcctaatac
1621 acttcagatt ttcttggaga gactaaagaa tgaaattacc aggttaacta cagtaaaggc
1681 attgacactg attgctgggt cacctttgaa gatagatttg aggcctgttc tgggagaagg
1741 ggttcctatc cttgcttcat ttcttagaaa aaaccagaga gctttgaaac tgggtactct
1801 ttctgccctt gatattctaa taaaaaacta tagtgacagc ttgacagctg ccatgattga
1861 tgcagttcta gatgagctcc cacctcttat cagcgaaagt gatatgcatg tttcacaaat
1921 ggccatcagt tttcttacca ctttggcaaa agtatatccc tcctcccttt caaagataag
1981 tggatccatt ctcaatgaac ttattggact tgtgagatca cccttattgc aggggggagc
2041 tcttagtgcc atgctagact ttttccaagc tctggttgtc actggaacaa ataatttagg
2101 atacatggat ttgttgcgca tgctgactgg tccagtttac tctcagagca cagctcttac
2161 tcataagcag tcttattatt ccattgccaa atgtgtagct gcccttactc gagcatgccc
2221 taaagaggga ccagctgtag taggtcagtt tattcaagat gtcaagaact caaggtctac
2281 agattccatt cgtctcttag ctctactttc tcttggagaa gttgggcatc atattgactt
2341 aagtggacag ttggaactaa aatctgtaat actagaagct ttctcatctc ctagtgaaga
2401 agtcaaatca gctgcatcct atgcattagg cagcattagt gtgggcaacc ttcctgaata
2461 tctgccgttt gtcctgcaag aaataactag tcaacccaaa aggcagtatc ttttacttca
2521 ttccttgaag gaaattatta gctctgcatc agtggtgggc cttaaaccat atgttgaaaa
2581 catctgggcc ttattactaa agcactgtga gtgtgcagag gaaggaacca gaaatgttgt
2641 tgctgaatgt ctaggaaaac tcactctaat tgatccagaa actctccttc cacggcttaa
2701 ggggtacttg atatcaggct catcatatgc ccgaagctca gtggttacgg ctgtgaaatt
2761 tacaatttct gaccatccac aacctattga tccactgtta aagaactgca taggtgattt
2821 cctaaaaact ttggaagacc cagatttgaa tgtgagaaga gtagccttgg tcacatttaa
2881 ttcagcagca cataacaagc catcattaat aagggatcta ttggatactg ttcttccaca
2941 tctttacaat gaaacaaaag ttagaaagga gcttataaga gaggtagaaa tgggtccatt
3001 taaacatacg gttgatgatg gtctggatat tagaaaggca gcatttgagt gtatgtacac
3061 acttctagac agttgtcttg atagacttga tatctttgaa tttctaaatc atgttgaaga
3121 tggtttgaag gaccattatg atattaagat gctgacattt ttaatgttgg tgagactgtc
3181 taccctttgt ccaagtgcag tactgcagag gttggaccga cttgttgagc cattacgtgc
3241 aacatgtaca actaaggtaa aggcaaactc agtaaagcag gagtttgaaa aacaagatga
3301 attaaagcga tctgccatga gagcagtagc agcactgcta accattccag aagcagagaa
3361 gagtccactg atgagtgaat tccagtcaca gatcagttct aaccctgagc tggcggctat
3421 ctttgaaagt atccagaaag attcatcatc tactaacttg gaatcaatgg acactagtta
3481 gatgtttgtt caccatgggg accattacat atgaccatac aatgcactga attgacaggt
3541 taatcataag acatggaaag agaagtgtct aaaagcttca aaatgttcca cttttttttc
3601 cttcatggag actgtttgtt tggctttctt ccattgttgt ttttgtagca tttatttcag
3661 aaatgtgtat ttccataatc cagaggttgt aaaaccacta gtgttttagt ggttacagca
3721 acatttgaaa tggaaactaa aagttaggat tttatggagt atggagatag ggtccagtat
3781 ctatttaccc tgtaatgttt aggattaaaa tgttaaaatt ttgtgaccat gaatttcttt
3841 cttttataaa ttttctcatt taaaaatcaa aaatcttgca aaacaaaaaa caaaaaaaaa
3901 aaaaaaaaaa
//