LOCUS BC026171 2533 bp mRNA linear HUM 08-DEC-2006 DEFINITION Homo sapiens family with sequence similarity 47, member A, mRNA (cDNA clone MGC:27003 IMAGE:4827969), complete cds. ACCESSION BC026171 VERSION BC026171.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2533) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2533) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Sep 16, 2003 this sequence version replaced BC026171.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 34 Row: c Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42821113. FEATURES Location/Qualifiers source 1..2533 /db_xref="H-InvDB:HIT000040126" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:27003 IMAGE:4827969" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2533 /gene="FAM47A" /gene_synonym="MGC27003" /db_xref="GeneID:158724" /db_xref="HGNC:HGNC:29962" CDS 37..2373 /gene="FAM47A" /gene_synonym="MGC27003" /codon_start=1 /product="FAM47A protein" /protein_id="AAH26171.1" /db_xref="GeneID:158724" /db_xref="HGNC:HGNC:29962" /translation="MGDQRLQDWLRSPGMDSKPWYCNKRPSKCFAKCKHRRLRFPPMD TQNWVLVKEGMDDFRYGCPSPEDTLVCRRDEFLLPKISLRGPQADPKSGQKKLLKKAA LFSKLSPAQLARKAFVEQVEAQLMAKHPLAMYPNLGEDMPPDLLLQVLKHLDPERELE DAWACCETQEKTTEVPTEPGKHPCGEFCLKPPETPVSHLLPEPPETGVSHLSPEPPKT PVSSLRPEPPETGESHLRPEPPETGVSHIRPGPPITRRRSSLLRQLLKLDSERKLEDA RAPCEGREKTTDEPTEPGKYPCGKFCPRPFETPLSHLRQEPPKTPVSSLRPEPPETGE SHLRLEHSKTRRGSSLRSEPSETGVSRLRLAPPKTRRGSSLHAEPSKTGVSHLSPEPP KTEVSHLHPVPPKTGVCHLRLEPPDTSQVSNLLLYILKVLDSGRTLKDVWDRCEARVK KTKEPTEPHKSPCGEPCLQPPETQVSHPHPEHPKTRRRSSLHSQPPKTRRTSSLRSEP PKTRRTSSLGPEPPKTRRVSSLRPELPKSRRVSSLHPEPPKAPESHQFSEPPKIRASY IKELLQEDTPSTKECVSDSLQYRYTSEKLREFFKWAGDLGADEESIRNLFDFTPKYRA THEDQKFKKVKECSSELKYSMELDEKDEDKFFSQEKYWGRKFHTPSNSYTAQRVKMKY GAWYLKPKLWKKLRSDEPLIDPKLLLKKPDEPDVLDDLYGPIAFKDFILSKGYEMPGI IQRLFARRGWTYDSVKTPIQRAMIFYKYKEIVEASEED" BASE COUNT 640 a 731 c 628 g 534 t ORIGIN 1 agtagctgga gacgtggcac cacagcgagg gccaccatgg gggaccagag gctgcaggac 61 tggctgaggt ccccgggcat ggactccaag ccctggtact gtaacaaacg gccttccaag 121 tgcttcgcga agtgcaagca caggcgcctg aggttcccac ccatggacac ccagaactgg 181 gtacttgtga aggagggcat ggacgacttc cgctacggct gtccgtctcc cgaagatact 241 ctcgtttgtc gccgtgacga gtttttactc cccaaaatat ctctcagagg tccccaagct 301 gaccccaaaa gcgggcagaa aaagctgctc aagaaagcgg ccctattttc caagctctct 361 ccagcccagc tagcacggaa ggcgttcgta gagcaagtgg aagcccagct aatggccaag 421 catcccttgg ccatgtaccc caatctggga gaagatatgc ctccagatct cctactacag 481 gtgctgaaac acctggatcc tgagagggag ctggaggacg cttgggcttg ttgtgagacc 541 caggagaaga caacagaggt acccactgag cctggtaaac atccctgtgg ggaattctgc 601 ctgaagcctc ccgagactcc ggtgtcccat ctcctcccag agcctcccga gactggagtg 661 tcccatctaa gcccggagcc tcccaagact ccggtgtcca gtctccgccc ggagcctcct 721 gagactggag agtcccatct ccgcccggag cctccagaga ctggagtgtc ccatatccgc 781 ccggggcctc ccatcactcg tcggagatcc agtctcctac gacagctgct gaaactggat 841 tctgagagga agctggaaga cgcacgggct ccttgtgagg gccgggagaa gacaactgac 901 gaacccacag agcctggtaa atacccttgt gggaaattct gtcctcggcc tttcgagact 961 ccactgtccc atctccgcca ggagcctccc aagactccgg tgtccagtct ccgcccggag 1021 cctccggaga ctggggagtc ccatctccgc ctagagcatt ccaagactcg tcgggggtcc 1081 agtctccgct cggagccttc cgagactgga gtgtcccgtc tccgcctagc gcctcccaag 1141 actcgtcggg ggtccagtct ccacgcggag ccttccaaga ctggagtgtc ccatctcagc 1201 ccggagcctc ccaagactga agtgtctcat ctccacccag tgcctcccaa gactggagtg 1261 tgccatctcc gcctggaacc tcccgacact agtcaggtgt ccaatctcct actatacata 1321 ctgaaagtgc tggattctgg gaggacgctg aaggacgtat gggatcgttg tgaggcccgg 1381 gtgaagaaaa ctaaggaacc caccgagcct cataaatccc cttgtgggga accctgcctg 1441 cagcctcccg agactcaggt gtcccatccc cacccggaac atcccaagac acgtcggagg 1501 tccagtctcc actcgcagcc tcccaagact cgtcggacgt ccagtctccg ctcggagcct 1561 cccaagactc gtcggacgtc cagtctcggt ccggagcctc ccaagactcg tcgagtgtcc 1621 agtctccgcc cggagcttcc caagagtcgt cgggtgtcca gtctccaccc ggagcctccc 1681 aaagctccag agtcccatca attctcggag cctcccaaga ttcgagcatc ctacataaaa 1741 gaactgcttc aggaagatac accaagcaca aaagagtgcg tttctgactc tcttcaatat 1801 agatacacat cggaaaaact ccgtgaattc ttcaagtggg ctggagacct gggagctgat 1861 gaagaatcca tcaggaatct gtttgacttt acccccaagt acagagcaac ccatgaggac 1921 caaaagttta agaaagtaaa ggagtgttcc tcagagctga agtacagcat ggagctagat 1981 gaaaaggatg aggacaaatt cttctcacag gaaaaatact ggggcaggaa attccacacg 2041 ccatcgaatt cttataccgc acagcgtgtg aagatgaagt atggagcatg gtacctcaag 2101 cctaagttgt ggaaaaagct aagaagtgat gaacctttga ttgaccccaa gctcttactt 2161 aaaaagcctg atgaacctga cgttcttgac gatctttatg gaccaattgc ctttaaggat 2221 ttcattctaa gcaagggcta tgaaatgcct ggcatcattc aaaggctgtt tgccaggagg 2281 ggatggactt atgactctgt taagactcct attcaacgtg caatgatatt ttacaagtac 2341 aaagaaatcg tagaggcatc ggaagaagat taggcagttt tcaatttact actcaattgg 2401 gtatttcttg ctctcatttt aatcatcaat cataatttat gatgactggc cccgtggatg 2461 cacaactttg gcaacatctg taaattcaat acctaatgtt tatcaatatt tcttaacgaa 2521 aaaaaaaaaa aaa //