LOCUS BC026159 2844 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens sex comb on midleg-like 1 (Drosophila), mRNA (cDNA
clone MGC:26252 IMAGE:4827364), complete cds.
ACCESSION BC026159
VERSION BC026159.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2844)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2844)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC026159.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: a Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49615097.
FEATURES Location/Qualifiers
source 1..2844
/db_xref="H-InvDB:HIT000050903"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26252 IMAGE:4827364"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2844
/gene="SCML1"
/db_xref="GeneID:6322"
/db_xref="HGNC:HGNC:10580"
/db_xref="MIM:300227"
CDS 329..1237
/gene="SCML1"
/codon_start=1
/product="sex comb on midleg-like 1 (Drosophila)"
/protein_id="AAH26159.2"
/db_xref="GeneID:6322"
/db_xref="HGNC:HGNC:10580"
/db_xref="MIM:300227"
/translation="MMSNSSSEIDVQEPNIVSDASCNTEEQLKTVDDVLIHCQVIYDA
LQNLDKKIDVIRRKVSKIQRFHARSLWTNHKRYGYKKHSYRLVKKLKLQKMKKNEVYE
TFSYPESYSPTLPVSRRENNSPSNLPRPSFCMEEYQRAELEEDPILSRTPSPVHPSDF
SEHNCQPYYASDGATYGSSSGLCLGNPRADSIHNTYSTDHASAAPPSVTRSPVENDGY
IEEGSITKHPSTWSVEAVVLFLKQTDPLALCPLVDLFRSHEIDGKALLLLTSDVLLKH
LGVKLGTAVKLCYYIDRLKQGKCFEN"
BASE COUNT 879 a 535 c 529 g 901 t
ORIGIN
1 ggtgtcgcgg gagctctctg atccactcag gggtcagggc atcactggtc tcgcgtgcgc
61 gtgaccaggc ccggtttccg gtgccaggac ctttccgaag cgtcgagtgg cctaacggtc
121 acagctgtcg cccatcggag aggcaggact actgcgagca gttttaccgc gacctccgga
181 ggccggcgtg acaggctctg tcactaaaat aggagtagag gtttaccact cttaggtgac
241 taagcagtat cacaaataaa ccctccagca agtttaaaaa taattaggtc caactcagag
301 gaagtggagt ttctcctgtt gcacaaaaat gatgtctaac agctccagtg aaatcgatgt
361 gcaggaaccg aatattgtat ctgacgcatc ctgtaatact gaagagcaac tgaagacagt
421 tgatgatgtc cttattcatt gccaggttat atatgatgct ctgcaaaacc tggataagaa
481 gattgatgtg attcgtagaa aggtttcaaa aatccaacgt ttccatgcga gatccctgtg
541 gacaaatcat aagcgatatg gatataaaaa gcattcttac cggcttgtta aaaagcttaa
601 actccagaaa atgaagaaaa atgaggttta cgagacattc tcctaccctg aaagttacag
661 ccccacttta ccagtgtcaa ggcgtgagaa taattccccg agcaaccttc caaggccatc
721 cttttgcatg gaagaatacc agcgagctga gctggaggag gacccgatcc tcagccgcac
781 tccgagtcca gtgcatccct cagatttctc tgagcataat tgtcagccgt attatgcatc
841 tgatggtgca acgtatggtt cttcttcagg gctctgcctt ggcaaccctc gggctgacag
901 catccacaac acttactcaa ctgaccatgc ttctgcagca ccaccttcag ttacaaggtc
961 accagttgaa aatgacggtt acatagagga aggaagcatc actaagcacc cttcaacctg
1021 gtcggtggaa gcagtggtcc tatttctaaa acaaacagat cctcttgcat tatgccctct
1081 tgtcgacctc ttcagaagcc atgaaattga cgggaaggct ctgctcctac tcacgagtga
1141 cgtgttgctg aagcacttgg gggtgaagct gggaacggct gtgaagctat gctactacat
1201 tgaccgactt aaacaaggaa aatgctttga aaattgaaaa aatccttgtg caaatttaga
1261 ttgggccaac ttctagaggc accaatgcct tcttagtgtg gaatcatttt tctgcccttt
1321 agtcgttttt gttttgtaga aagtatctct caaaatatat tatagctaga attgtagaac
1381 tatgttatag tccagtctac ttctttaaaa accatttaaa ctgctagata gtattagaat
1441 agtccaatag aaaattcatt ctttataggt ctttaaaaat tacttttatt atattgttta
1501 caaatatatt tcatgcaaga aacagaaaaa aaaaaaaccc tttgattctg gttcatctcg
1561 atacagagaa ccaaaacagc taagagaggt attatcaggg ttgacaactc ctatgattga
1621 atctatggga attattcctc agaagagaat ttaaaggtgt acccatatat atctctttct
1681 ggagtatttt atctgtctga tgttgcagta ttctacaagt ttccagaaag agaatagcca
1741 tataaattat tttcctttct gctattattt ctctatatgt tttatttatt cagatttaga
1801 gtaaaaaata agcatataaa cttttattat gtgctcttaa cagttttaag ataaactata
1861 ggatagatag aatggttatt ttatgcaaga aatattgtac cgcaagggtg gtttggatga
1921 agtctgacta ctttttttca aacaaactat tatattaaaa ctgtcatatt ttggctaagt
1981 ttggacctat aactacactt tcattgtttg catctctcta tgaagatacg tctgtccaaa
2041 cttttaaaag gcataactgt attttatgtg tttattcttt atatagatag tattttatat
2101 tttattctca cccgaagtat tcacacaatc tttttaaaaa aaatttgaaa tggcattttg
2161 tattgccaca gaggtaggat gagccatata ttagtgaaat gttttatttt gtaaaatata
2221 aatggattat ttgccatcat tagtacctct caacttactt tttagaggac aagaaacaat
2281 ctgtagattg gtttccatac agggaagttc tccgtcctat gcaatgtttc taattaattt
2341 gcttaattct gagccattaa tcctgctaca ctttgaatga tacattaatt cagactaatc
2401 tttgggggct ttattttgta agttagaact ttcaagggaa acatgttcaa cactattatt
2461 ttgttataaa tttataactt tgttattaca ttgtgtaaca aatataaggt ttacgagcta
2521 tgagaattgg tgctatcacc attagctatt tgctgtaatg tcaagaaaat gttcaccaga
2581 tgcaagaatg taccttttct ttttagaaag ccaaatgtac tttagacatg aatgcaacta
2641 tttaaagaat agcttcatca atgttattcc ttacatgtca taagattctt acttaaactt
2701 ggtcttcttt caaattgttt gtatgaagat gctgtaccca cttgaacagt cctcaggtgt
2761 ttacataaat actatgtttt acagttttca tattttaaaa tattaataaa gttaaatcac
2821 aatagttcaa aaaaaaaaaa aaaa
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