LOCUS BC026110 2306 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens potassium voltage-gated channel, subfamily F, member
1, mRNA (cDNA clone MGC:33316 IMAGE:4797827), complete cds.
ACCESSION BC026110
VERSION BC026110.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2306)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2306)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC026110.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: b Column: 14.
FEATURES Location/Qualifiers
source 1..2306
/db_xref="H-InvDB:HIT000040111"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33316 IMAGE:4797827"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2306
/gene="KCNF1"
/gene_synonym="IK8"
/gene_synonym="kH1"
/gene_synonym="KV5.1"
/gene_synonym="MGC33316"
/db_xref="GeneID:3754"
/db_xref="HGNC:HGNC:6246"
/db_xref="MIM:603787"
CDS 493..1977
/gene="KCNF1"
/gene_synonym="IK8"
/gene_synonym="kH1"
/gene_synonym="KV5.1"
/gene_synonym="MGC33316"
/codon_start=1
/product="potassium voltage-gated channel, subfamily F,
member 1"
/protein_id="AAH26110.1"
/db_xref="GeneID:3754"
/db_xref="HGNC:HGNC:6246"
/db_xref="MIM:603787"
/translation="MDGSGERSLPEPGSQSSAASDDIEIVVNVGGVRQVLYGDLLSQY
PETRLAELINCLAGGYDTIFSLCDDYDPGKREFYFDRDPDAFKCVIEVYYFGEVHMKK
GICPICFKNEMDFWKVDLKFLDDCCKSHLSEKREELEEIARRVQLILDDLGVDAAEGR
WRRCQKCVWKFLEKPESSCPARVVAVLSFLLILVSSVVMCMGTIPELQVLDAEGNRVE
HPTLENVETACIGWFTLEYLLRLFSSPNKLHFALSFMNIVDVLAILPFYVSLTLTHLG
ARMMELTNVQQAVQALRIMRIARIFKLARHSSGLQTLTYALKRSFKELGLLLMYLAVG
IFVFSALGYTMEQSHPETLFKSIPQSFWWAIITMTTVGYGDIYPKTTLGKLNAAISFL
CGVIAIALPIHPIINNFVRYYNKQRVLETAAKHELELMELNSSSGGEGKTGGSRSDLD
NLPPEPAGKEAPSCSSRLKLSHSDTFIPLLTEEKHHRTRLQSCK"
BASE COUNT 409 a 785 c 751 g 361 t
ORIGIN
1 ctttgtgttt agaaaaggct cgggcaaagc cagcccaagt tcgctctctg cacacctcga
61 gcacctcgcg gacggcgtgg gtccgccagc tccgggacct gccgccgctg cctgcgcgcc
121 ccggggcgga ggacggtgcc agccgcccac gaggagaccc cgctcccgca ggaggccgag
181 ctgaagcggc ggagcgcgcc gccagccagc cggggtgagt gccccgggcg aggccggcgg
241 ccgccaaagc ccccgcgggc tcgcccgggc gcccggatgc cagccccgag ccccgccgcc
301 gggtgcatgc ctcccccgcg gcgcgccccc gcaggctgct gcccgctgtg accgcccttc
361 cccgcaggcg ggcgccggcc aggctctccc cgagatcagc gcacgggtgg cacccgccgg
421 acccccagcg gcagcggcgg cggcggctgc agggggcgcg gggcggaggc tgcgagggcg
481 cgcgcgggga ggatggacgg gtccggggag cgcagcctcc cggagccggg cagccagagc
541 tccgctgcca gcgacgacat agagatagtc gtcaacgtgg ggggcgtgcg gcaggtgctg
601 tacggggacc tcctcagtca gtaccctgag acccggctgg cggagctcat caactgcttg
661 gctgggggct acgacaccat cttctccctg tgcgacgact acgaccccgg caagcgcgag
721 ttctactttg acagggaccc ggacgccttc aagtgtgtca tcgaggtgta ctatttcggg
781 gaggtccaca tgaagaaggg catctgcccc atctgcttca agaacgagat ggacttctgg
841 aaggtggacc tcaagttcct ggacgactgt tgcaagagcc acctgagcga gaagcgcgag
901 gagctggagg agatcgcgcg ccgcgtgcag ctcatcctgg acgacctggg cgtggacgcg
961 gccgagggcc gctggcgccg ctgccagaag tgcgtctgga agttcctgga gaagcccgag
1021 tcgtcgtgcc cggcgcgggt ggtggccgtg ctctccttcc tgctcatcct cgtctcgtcc
1081 gtggtcatgt gcatgggcac catccccgag ctgcaggtgc tggacgccga gggcaaccgc
1141 gtggagcacc cgacgctgga gaacgtggag acggcgtgca ttggctggtt caccctggag
1201 tacctgctgc gcctcttctc gtcacccaac aagctgcact tcgcgctgtc cttcatgaac
1261 attgtggacg tgctggccat cctccccttc tacgtgagcc tcacgctcac gcacctgggt
1321 gcccgcatga tggagctgac caacgtgcag caggccgtgc aggcgctgcg gatcatgcgc
1381 atcgcgcgca tcttcaagct ggcccgccac tcctcgggcc tgcagaccct cacctatgcc
1441 ctcaagcgca gcttcaagga actggggctg ctgctcatgt acctggcagt gggtatcttc
1501 gtcttctctg ccctgggcta caccatggag cagagccatc cagagaccct gtttaagagc
1561 atcccccagt ccttctggtg ggccatcatc accatgacca ccgtcggcta cggcgacatc
1621 taccccaaga ccacgctggg caagctcaac gcggccatca gcttcttgtg tggtgtcatc
1681 gccatcgccc tgcccatcca ccccatcatc aacaactttg tcaggtacta caacaagcag
1741 cgcgtcctgg agaccgcggc caagcacgag ctggagctga tggaactcaa ctccagcagc
1801 gggggcgagg gcaagaccgg gggctcccgc agtgacctgg acaacctccc tccagagcct
1861 gcggggaagg aggcgccgag ctgcagcagc cggctgaagc tctcccacag cgacaccttc
1921 atccccctcc tgaccgagga gaagcaccac aggacccggc tccagagttg caagtgacag
1981 gagggcccct caggcagaga tggaccaggc ggtggacaga tgggtagatg tggcaggcat
2041 gtcatcgaca gcacagaagg gctgtcctgt gtccccccaa ccctcccctg gacagactct
2101 gaaggccctc ccggcacctc tgccaaggct gggtaagact cctctatgtt gcctgctgtc
2161 caggagcccg ggagggaggg gtgtgcagga gccgcagggc cgtgtgggac gagtggaggc
2221 cgcggcctgg ctggcacgag agcccacgcc cgcttctgta tctccctcaa taaagcctcc
2281 tgctctgtgc aaaaaaaaaa aaaaaa
//