LOCUS BC026097 1914 bp mRNA linear HUM 01-JUN-2004
DEFINITION Homo sapiens leucine-rich repeats and calponin homology (CH) domain
containing 1, mRNA (cDNA clone IMAGE:4669781), partial cds.
ACCESSION BC026097
VERSION BC026097.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1914)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1914)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 38 Row: h Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..1914
/db_xref="H-InvDB:HIT000091187"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4669781"
/tissue_type="Prostate, adenocarcinoma."
/clone_lib="NIH_MGC_60"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene <1..1914
/gene="LRCH1"
/gene_synonym="CHDC1"
/gene_synonym="KIAA1016"
/db_xref="GeneID:23143"
CDS <1..974
/gene="LRCH1"
/gene_synonym="CHDC1"
/gene_synonym="KIAA1016"
/codon_start=3
/product="LRCH1 protein"
/protein_id="AAH26097.1"
/db_xref="GeneID:23143"
/translation="GEFHQEFQPEPSLLGDSTNSGEERDQFTDRADGLHSEFMNYKAR
AEDCEELLRIEEDVHWQTEGIISSSKDQDMDIAMIEQLREAVDLLQDPNGLSTDITER
SVLNLYPMGSAEALELQDSALNGQIQLETSPVCEVQSDLTLQSNGSQYSPNEIRENSP
AVSPTTNSTAPFGLKPRSVFLRPQRNLESIDPQFTIRRKMEQMREEKELVEQLRESIE
MRLKVSLHEDLGAALMDGVVLCHLVNHIRPRSVVSIHVPSPAVPKLSMAKCRRNVENF
LEACRKLGVPEEKLCLPHHILEEKGLVKVGITIQALLDITVTKALFT"
BASE COUNT 604 a 405 c 402 g 503 t
ORIGIN
1 ggggggaatt tcatcaggaa tttcaaccgg agccttccct tttgggtgac agcaccaact
61 caggagaaga aagagaccag tttactgata gagcagatgg tctccattcg gaatttatga
121 actataaggc aagggcagaa gactgtgaag agctgttacg gatagaagag gatgtgcact
181 ggcaaactga gggcataata agttcatcca aagatcagga catggatata gcaatgatcg
241 agcagctgag agaagcagta gatttgctgc aagatcccaa tggattaagc acagatatta
301 cagagagaag tgttttaaac ctatatccta tgggatcagc agaagcctta gaattacaag
361 attctgcact gaatggtcaa atacagctgg agacatctcc ggtgtgtgag gtgcaaagtg
421 atctaacatt acagagtaac gggagccagt attctccaaa tgagattaga gagaactccc
481 ctgcagtctc tcctaccaca aacagcacag ctccatttgg cctgaagcct cgatcagtgt
541 ttctaagacc tcagagaaat ttggaatcta tagacccgca gtttacaatc cggaggaaaa
601 tggagcagat gagagaagag aaagagctgg tggaacaact tcgtgagagc attgagatga
661 gattgaaggt cagtctacac gaagacctgg gggcagccct catggatggt gtcgtcctct
721 gccatctggt caaccacatc cgcccacggt cggttgtaag catccatgtc ccatcaccag
781 cggttcccaa acttagcatg gccaaatgca gaagaaatgt ggaaaacttt ttggaagcgt
841 gccgaaaatt aggagtacca gaggaaaagc tatgtctccc ccaccacatc cttgaagaaa
901 aaggcctggt caaagtgggc attaccattc aagcattact agacatcacc gtaacgaagg
961 ctctgttcac atgaaactac cccttctcca ttgggggctc agactctgct ctcatccagg
1021 atcctgaact ctgctccagg cacctgttca accctctctc ccacccactg cctgtcactt
1081 cactgactcc agttacattg aaacaatttt cagtctaagg gaggattttc tacctttcag
1141 agctgacctc cgactttaag acttgacagg tatttatctt gaaaccagag agggagctgg
1201 aggaaaaaaa aactgagcag cacatcaatg ccttttccac cctccttcat cctttccaca
1261 ctcaccgact gccattacca aaacgccaag cacaaccgtt ttgcagcaag acgcattcgt
1321 tttattaaaa ccaaactcgt tatgtattta gtggggggag gggggcacaa tcaggttttt
1381 caccaccaaa tttttcgaga ggtttcttga gaccattgcc ttttaaaaaa ctattttcga
1441 catacaaaat atttatataa atattattta ttagtgagtt gttattcatc ctttggatgc
1501 aaattgtaaa ttaggaaact attttattac tgcttttttg tggttaaaca ctttatttta
1561 atataaatgt tgagttattt tctatcctct ttggtgtgcg gtagtttagg tctcagtaat
1621 gtttctggta tatatgattc caaaaaaaag cgaaaaacag gtgcttttag gacacaactt
1681 ttctggggag gcaatattga cactttggtt tgtggaacgt tggtcttatt tatatttctg
1741 cattccatcc agtttcctac attccagcag ccctctgtcc cccaatataa tgaactgact
1801 aaaatcaaga gagcacccca aagttatttg taaatagctg tgatggaaaa aaaaaagaca
1861 tattaaactt gaagctaaaa tgcgaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//