LOCUS BC026089 1715 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens solute carrier family 30 (zinc transporter), member 4,
mRNA (cDNA clone MGC:27012 IMAGE:4829839), complete cds.
ACCESSION BC026089
VERSION BC026089.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1715)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1715)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC026089.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: h Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52630415.
FEATURES Location/Qualifiers
source 1..1715
/db_xref="H-InvDB:HIT000040100"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:27012 IMAGE:4829839"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1715
/gene="SLC30A4"
/db_xref="GeneID:7782"
/db_xref="HGNC:HGNC:11015"
/db_xref="MIM:602095"
CDS 313..1602
/gene="SLC30A4"
/codon_start=1
/product="solute carrier family 30 (zinc transporter),
member 4"
/protein_id="AAH26089.1"
/db_xref="GeneID:7782"
/db_xref="HGNC:HGNC:11015"
/db_xref="MIM:602095"
/translation="MAGSGAWKRLKSMLRKDDAPLFLNDTSAFDFSDEAGDEGLSRFN
KLRVVVADDGSEAPERPVNGAHPTLQADDDSLLDQDLPLTNSQLSLKVDSCDNCSKQR
EILKQRKVKARLTIAAVLYLLFMIGELVGGYIANSLAIMTDALHMLTDLSAIILTLLA
LWLSSKSPTKRFTFGFHRLEVLSAMISVLLVYILMGFLLYEAVQRTIHMNYEINGDIM
LITAAVGVAVNVIMGFLLNQSGHRHSHSHSLPSNSPTRGSGCERNHGQDSLAVRAAFV
HALGDLVQSVGVLIAAYIIRFKPEYKIADPICTYVFSLLVAFTTFRIIWDTVVIILEG
VPSHLNVDYIKEALMKIEDVYSVEDLNIWSLTSGKSTAIVHIQLIPGSSSKWEEVQSK
ANHLLLNTFGMYRCTIQLQSYRQEVDRTCANCQSSSP"
BASE COUNT 454 a 404 c 441 g 416 t
ORIGIN
1 gcagggcggg gagaggcggt ggctgtgggc gtccggcccc gaacctgtca gacctgggga
61 gccggcctcc agcagcgggc gcggcgggcg cgagcacgac cccactctcc tgcggccgcg
121 ggtggagcag cgcgagcccg cctcgctgag ccggccgggg gcggggagat gagttgcggc
181 cccgcggcag cgccccagga tggggaggga cgcgcggcac tgccctcgag aactggcgct
241 ccggtgaagt aggcgccgcc ggccgtccgc ctcccccaag ccgttccgca ccgcggccgc
301 tcagcctctg ccatggccgg ctctggcgcg tggaagcgcc tcaaatctat gctaaggaag
361 gatgatgcgc cgctgttttt aaatgacacc agcgcctttg acttctcgga tgaggcgggg
421 gacgaggggc tttctcggtt caacaaactt cgagttgtgg tggccgatga cggttccgaa
481 gccccggaaa ggcctgttaa cggggcgcac ccgaccctcc aggccgacga tgattcctta
541 ctggaccaag acttaccttt gaccaacagt cagctgagtt tgaaggtgga ctcctgtgac
601 aactgcagca aacagagaga gatactgaag cagagaaagg tgaaagccag gttgaccatt
661 gctgccgttc tgtacttgct tttcatgatt ggagaacttg taggtggata cattgcaaat
721 agcctagcaa tcatgacaga tgcacttcat atgttaactg acctaagcgc catcatactc
781 accctgcttg ctttgtggct atcatcaaaa tcaccaacca aaagattcac ctttggattt
841 catcgcttag aggttttgtc agctatgatt agtgtgctgt tggtgtatat acttatggga
901 ttcctcttat atgaagctgt gcaaagaact atccatatga actatgaaat aaatggagat
961 ataatgctca tcaccgcagc tgttggagtt gcagttaatg taataatggg gtttctgttg
1021 aaccagtctg gtcaccgtca ctcccattcc cactccctgc cttcaaattc ccctaccaga
1081 ggttctgggt gtgaacgtaa ccatgggcag gatagcctgg cagtgagagc tgcatttgta
1141 catgctttgg gagatttggt acagagtgtt ggtgtgctaa tagctgcata catcatacga
1201 ttcaagccag aatacaagat tgctgacccc atctgtacat acgtattttc attacttgtg
1261 gcttttacaa catttcgaat catatgggat acagtagtta taatactaga aggtgtgcca
1321 agccatttga atgtagacta tatcaaagaa gccttgatga aaatagaaga tgtatattca
1381 gtcgaagatt taaatatctg gtctctcact tcaggaaaat ctactgccat agttcacata
1441 cagctaattc ctggaagttc atctaaatgg gaggaagtac agtccaaagc aaaccattta
1501 ttattgaaca catttggcat gtatagatgt actattcagc ttcagagtta caggcaagaa
1561 gtggacagaa cttgtgcaaa ttgtcagagt tctagtccct aattttatgt attttgggaa
1621 ctcctgcctt atttatcctg cagtcacaga cttgagagca ataaatgcaa acctaaatga
1681 gaaaaaaaaa aaaaaaaaga aaaaaaaaaa aaaaa
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