LOCUS BC026072 2392 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 12, mRNA (cDNA clone
MGC:26480 IMAGE:4830251), complete cds.
ACCESSION BC026072
VERSION BC026072.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2392)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2392)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: h Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32698814.
FEATURES Location/Qualifiers
source 1..2392
/db_xref="H-InvDB:HIT000040090"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26480 IMAGE:4830251"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2392
/gene="USP12"
/db_xref="GeneID:219333"
/db_xref="HGNC:HGNC:20485"
CDS 259..1371
/gene="USP12"
/codon_start=1
/product="ubiquitin specific peptidase 12"
/protein_id="AAH26072.1"
/db_xref="GeneID:219333"
/db_xref="HGNC:HGNC:20485"
/translation="MEILMTVSKFASICTMGANASALEKEIGPEQFPVNEHYFGLVNF
GNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTCLADLFHSIATQKKKVGVIP
PKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGNIDN
ENNNSTPDPTWVDEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRG
FSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSY
RVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDD
IVEKIDAQAIEEFYGLTSDISKNSESGYILFYQSRD"
BASE COUNT 719 a 459 c 538 g 676 t
ORIGIN
1 agcggggcag cggctgcgcc ctgcgccggg gcggagccgg gggcgggccg gcggccggca
61 ggcgggggct ggggcccgag gccgggagtg cctgagcgcc ggcggcgacg acggcagcgg
121 cggcccagcg ggctcggtgg ttgggtccgc ggcggctcgg ggtccgcccg cgggctgcgg
181 tgcgagcggg cggcccggct cccctcctcc cccgcccgcc gccgccgctg tgattgggtg
241 gaagatggcg ctggccggat ggaaatccta atgacagtct ccaaattcgc ctccatctgt
301 accatgggcg ccaatgcttc ggcattagag aaagagattg gtccagaaca gtttccggtc
361 aatgagcact attttggatt agtcaatttt gggaatacct gctactgcaa ttcagttctt
421 caagcacttt atttttgtcg tccatttcgg gaaaaagttc ttgcgtataa gagtcaacct
481 aggaaaaagg agagccttct tacatgctta gcagatctct tccatagcat agccactcag
541 aagaaaaagg ttggagtaat accccctaag aagttcatca caagattacg gaaagaaaat
601 gagctttttg acaactacat gcaacaagat gcccatgaat tcttaaatta cctactaaat
661 acaattgctg atattttaca agaagagaga aagcaggaaa aacaaaatgg tcgtttacct
721 aatggtaata ttgataatga aaataataac agcacaccag acccaacgtg ggttgatgag
781 atttttcagg gaacattaac taatgaaacc agatgtctta cttgtgaaac tataagcagc
841 aaagatgaag attttttaga cctttctgtt gacgtggaac aaaatacatc aattactcac
901 tgcttaaggg gtttcagcaa cacagaaact ctgtgcagtg aatacaagta ttactgtgaa
961 gagtgtcgca gcaaacagga agcacacaaa cggatgaaag ttaaaaaact gcccatgatt
1021 ctagctctac acctgaagag atttaaatat atggatcaac ttcatcgata tacaaaactc
1081 tcttaccggg tagtttttcc tttagaactt cgtctgttta acacttcagg tgatgccacc
1141 aatccagaca gaatgtacga ccttgttgct gttgtggttc actgtggaag tggtcccaat
1201 cgaggccatt atattgcaat agttaagagt catgattttt ggttgttgtt tgatgacgac
1261 attgtagaaa aaatagatgc acaagctatt gaagaattct acgggttgac atcagatatc
1321 tcaaagaact ctgagtctgg ttacatcctt ttctatcagt ctcgggactg agagggaacc
1381 gtgatgaaga gacactttct gcctcatttc ttctctggtt attttggaaa ggatcaagca
1441 ctgatttttc aagaaaagag aaatgcagga agctcagggg gcagtagcac actttgcaca
1501 cgataaagca aagacgatgg attgacaagc ccttccgatc atggtagttg atttatttgc
1561 tcaggtatca tgctgtctgt acagttccat acaacaagga ggtgaaatca gagataccag
1621 ctcctctttt aaaacagcct tccagtcatt ggcacgcatt ttctctttat taattgcacc
1681 aataatgctt tgaattcctt gggggtgcag tagaaagaat cggaatctgt gccgtattga
1741 taaggagatg atgttgaaca cactgcataa atttgcctgg ttcagtatgt atagaagcat
1801 attcagtggt cttttcaaga gtaaaccaga aatacttttg ggcccaacac ttgcagttgc
1861 cttcctgatg taaaaactaa catgctagat aatccagtgt cgggaagaca aagatgtttt
1921 gcttctctga agaagcttat aataatatac agtatatgta tatgtaggga gcaattggtc
1981 aaaagtggct ttttgtttcc ccaaggggaa agactggctt tgtaattata attttttcct
2041 tatttatttt acttaaaact ggtagagtct aagtattata tgaagtgccc atgattctgt
2101 cagtaaattt gaacatattt ttattagtta atgtcagttt aagttgtcct tttgtttgtt
2161 tctattttta aggtgaattt taatttctat ctgaaatcag ttaagatacc ttgagaaaaa
2221 ctgcagtgag aggagataaa tatccttttt caggaggaac tgatatctct ggctaaatat
2281 ttgtcctttt attatggttt ctaaatcagt tattttcttc agctttaatt tcataaaatt
2341 aaaaaactat tttaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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