LOCUS BC026062 1825 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens fusion (involved in t(12;16) in malignant liposarcoma), mRNA (cDNA clone MGC:16383 IMAGE:3937437), complete cds. ACCESSION BC026062 VERSION BC026062.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1825) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1825) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC026062.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 25 Row: d Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58218971. FEATURES Location/Qualifiers source 1..1825 /db_xref="H-InvDB:HIT000040085" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16383 IMAGE:3937437" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1825 /gene="FUS" /gene_synonym="FUS-CHOP" /gene_synonym="FUS1" /gene_synonym="TLS" /db_xref="GeneID:2521" /db_xref="HGNC:HGNC:4010" /db_xref="MIM:137070" CDS 59..1639 /gene="FUS" /gene_synonym="FUS-CHOP" /gene_synonym="FUS1" /gene_synonym="TLS" /codon_start=1 /product="fusion (involved in t(12;16) in malignant liposarcoma)" /protein_id="AAH26062.1" /db_xref="GeneID:2521" /db_xref="HGNC:HGNC:4010" /db_xref="MIM:137070" /translation="MASNDYTQQATQSYGAYPTQPGQGYSQQSSQPHGQQSYSGYSQS TDTSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQ QPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQGYGQQNQ YNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGR GGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHD SEQDNSDNNTIFVQGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLK GEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPM GRGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAP KPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFGP GKMDSRGEHRQDRRERPY" BASE COUNT 438 a 419 c 596 g 372 t ORIGIN 1 cggtgctcag cggtgttgga acttcgttgc ttgcttgcct gtgcgcgcgt gcgcggacat 61 ggcctcaaac gattataccc aacaagcaac ccaaagctat ggggcctacc ccacccagcc 121 cgggcagggc tattcccagc agagcagtca gccccacgga cagcagagtt acagtggtta 181 tagccagtcc acggacactt caggctatgg ccagagcagc tattcttctt atggccagag 241 ccagaacaca ggctatggaa ctcagtcaac tccccaggga tatggctcga ctggcggcta 301 tggcagtagc cagagctccc aatcgtctta cgggcagcag tcctcctatc ctggctatgg 361 ccagcagcca gctcccagca gcacctcggg aagttacggt agcagttctc agagcagcag 421 ctatgggcag ccccagagtg ggagctacag ccagcagcct agctatggtg gacagcagca 481 aagctatgga cagcagcaaa gctataatcc ccctcagggc tatggacagc agaaccagta 541 caacagcagc agtggtggtg gaggtggagg tggaggtgga ggtaactatg gccaagatca 601 atcctccatg agtagtggtg gtggcagtgg tggcggttat ggcaatcaag accagagtgg 661 tggaggtggc agcggtggct atggacagca ggaccgtgga ggccgcggca ggggtggcag 721 tggtggcggc ggcggcggcg gcggtggtgg ttacaaccgc agcagtggtg gctatgaacc 781 cagaggtcgt ggaggtggcc gtggaggcag aggtggcatg ggcggaagtg accgtggtgg 841 cttcaataaa tttggtggcc ctcgggacca aggatcacgt catgactccg aacaggataa 901 ttcagacaac aacaccatct ttgtgcaagg cctgggtgag aatgttacaa ttgagtctgt 961 ggctgattac ttcaagcaga ttggtattat taagacaaac aagaaaacgg gacagcccat 1021 gattaatttg tacacagaca gggaaactgg caagctgaag ggagaggcaa cggtctcttt 1081 tgatgaccca ccttcagcta aagcagctat tgactggttt gatggtaaag aattctccgg 1141 aaatcctatc aaggtctcat ttgctactcg ccgggcagac tttaatcggg gtggtggcaa 1201 tggtcgtgga ggccgagggc gaggaggacc catgggccgt ggaggctatg gaggtggtgg 1261 cagtggtggt ggtggccgag gaggatttcc cagtggaggt ggtggcggtg gaggacagca 1321 gcgagctggt gactggaagt gtcctaatcc cacctgtgag aatatgaact tctcttggag 1381 gaatgaatgc aaccagtgta aggcccctaa accagatggc ccaggagggg gaccaggtgg 1441 ctctcacatg gggggtaact acggggatga tcgtcgtggt ggcagaggag gctatgatcg 1501 aggcggctac cggggccgcg gcggggaccg tggaggcttc cgagggggcc ggggtggtgg 1561 ggacagaggt ggctttggcc ctggcaagat ggattccagg ggtgagcaca gacaggatcg 1621 cagggagagg ccgtattaat tagcctggct ccccaggttc tggaacagct ttttgtcctg 1681 tacccagtgt taccctcgtt attttgtaac cttccaattc ctgatcaccc aagggttttt 1741 ttgtgtcgga ctatgtaatt gtaactatac ctctggttcc cattaaaagt gaccatttta 1801 gttaaaaaaa aaaaaaaaaa aaaaa //