LOCUS BC026040 3117 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ring finger protein 185, mRNA (cDNA clone MGC:39318
IMAGE:4866294), complete cds.
ACCESSION BC026040
VERSION BC026040.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3117)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3117)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: h Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542782.
FEATURES Location/Qualifiers
source 1..3117
/db_xref="H-InvDB:HIT000258987"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39318 IMAGE:4866294"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3117
/gene="RNF185"
/gene_synonym="FLJ38628"
/db_xref="GeneID:91445"
/db_xref="HGNC:HGNC:26783"
CDS 93..671
/gene="RNF185"
/gene_synonym="FLJ38628"
/codon_start=1
/product="ring finger protein 185"
/protein_id="AAH26040.1"
/db_xref="GeneID:91445"
/db_xref="HGNC:HGNC:26783"
/translation="MASKGPSASASPENSSAGGPSGSSNGAGESGGQDSTFECNICLD
TAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGSTGQQDP
REKTPPRPQGQRPEPENRGGFQGFGFGDGGFQMSFGIGAFPFGIFATAFNINDGRPPP
AVPGTPQYVDEQFLSRLFLFVALVIMFWLLIA"
BASE COUNT 773 a 784 c 756 g 804 t
ORIGIN
1 cgaaaaactg attgactggg ctggcgttaa ctgtgcggag gcaggatttc cctggggaaa
61 gtcttcactc agagcttcgc tgacagccaa ggatggcaag caaggggccc tcggcctctg
121 catctcctga gaactccagt gcaggggggc ccagtgggag cagcaatggc gctggcgaga
181 gcggagggca ggacagcact ttcgagtgca acatctgctt ggacacagcc aaggatgccg
241 tcatcagcct gtgtggccac ctcttctgtt ggccgtgttt acatcagtgg ttggagacca
301 gacctaacag acaggtgtgt cctgtttgca aagctggcat cagccgagac aaggtcatcc
361 ccctctatgg aaggggcagc actgggcaac aggaccccag agagaagacc cctcctcgtc
421 ctcaaggaca gaggccagag ccggagaata gagggggatt tcaaggattt ggatttggag
481 atggtggctt ccagatgtct tttggaattg gggcatttcc ctttgggata tttgccacag
541 catttaatat aaatgatggg cggcctcctc cagctgtccc tgggacaccc cagtatgtgg
601 acgagcagtt cctgtcacgc ctcttcctat ttgtggccct ggtgatcatg ttctggctcc
661 tgattgccta atgctgggct cctgcctaca tccgtggcag ggctctggac tggtgacgtg
721 ccaccccaac tcctggtgtt tggcttcctg gctaatcttg actcctggaa tcagtgggat
781 cagtaacaca tcaaggagtc ttgtttcttc atcagagctt tggaactcga gaccagttgg
841 cgatgacccc tgaatatcgc caccgctgta aacactctat aacttcaggc cttggcattg
901 agtcatctct catgggtgac accatgaaat cttgtttcag ccagttctgc aggtcctgac
961 tctgcagagg gaagaggcag aaagagagaa actgtcagag tataatttca cctgagttta
1021 atattacaga aacaaaggga tgcaccaaat ggtatttctg gaaattttca tgtctttaaa
1081 taccccttgg taagttgctt ctgaagccag tgggggctcc tcagatagag aggttcccct
1141 ttcaaatccc agtgccgctc tgttctcttt ccttcccctc ccactccccc tcttcttcct
1201 ctgtagagat gcaagaaatt gctgtcccat aaaaatcata attgcagtag ctaaagctgg
1261 ggtcacttcg tgaattcacc agagactcaa agatctttta ttggctctgg gctgtgctca
1321 gtgtctttgg cctcagagaa caacttgaat gacttcctgg tttcctggca taaattattc
1381 ctggtgagac atgtggctta actcacaggt ttcccatcag ctttctccct aaaactatgt
1441 tcatctgcct ctctctgcca gagaacatac agccgagaat actgccgaag ctgagactga
1501 ctactgtgca ttaggaaaga cctggagtca ggactttggt gggatttgga gctccgaggc
1561 agtaataact gaacaagcag ccctgtcccc taggctgcag aagcttgaat gcatcctctc
1621 ccagaacctg ccacaggaaa ctgggggctt tgtcaggtca gcccaactgc atgcaaaaga
1681 ccaccatcct cagaagccaa gttgtctttt atgaagaggc aaggaaaggg gaaacccaca
1741 tgtgaccctg attttggtat ggcttgatag agttccctga aaactccttg tatgtgtgct
1801 aaaaccaggg aagcatgtga ctgccaagca ggcaacccct gatgatttgt aaagccaggt
1861 ggcagggcct tggggagccc cagcacaatg atattgtgtg gtcttccctc ctgtggaatc
1921 gaggggaaat tattcttccc aataccttga tttgattttc agtttcataa gcttcttcct
1981 ctgaatctta ttgagggact atggtaccaa gcaggtagga ctgttcacct ggtggaacag
2041 ttcttgctct gccttctagg cttcatccca gaaatccagc ctctttctgg agaccccaaa
2101 gctggaggga gatgggcttt cctctgggcc tctctcctac tttgccatcc acactgctcc
2161 tggctaaccc cagcaataac caacaaatgg taggaagccc catctattgc tttttctcaa
2221 ttatgactgc atagtttgtg gaaacaaaga tcttgaggaa gatgagggaa gccctcccct
2281 cttcatagtc cccatctctt ctcctttgta cctgtcaaca ccagagttca gtgtttaaac
2341 agacaaaata taaagtattg agtaggtggt tcatatgccg aatccacttg gtaggaagaa
2401 accaccagct ttatagtgtg cctgatagat tttaaacatt cctgggcacc cactcaagag
2461 tgctcttttt atcaccttct ggaaatccgc aaagttgcag gggcctctgg agtgtctctt
2521 ctctagagag aattggtggg acccccctca gtgcagtggc cccaactagt ggagggagag
2581 aggacttaag tcagatggac tcaacagaaa tgggtttcca gaagaataat gaaaagttgt
2641 gggtaggaaa atgaatcatt tggactcttc aatgaaatgg agtgagccca ggagagctca
2701 gccaacagag gcactctggg aacctgttag taaagccagg ctggccaaat gccatttgat
2761 tttgaacctc gtaggtcccc actcaccctc tgccaggagc taagtaaggc aggagagctg
2821 acttgggact cctggctcgg ccccaacagg gagccccctt cccaccatcc ttcggcaagc
2881 tcaccacctc atccttctgc caaggcagct ttcctttctt ttgtgtgttt tctgtgttct
2941 tagcctccac cctcctcctg ccacccttgt ggactaggac caggtcctga ccccagtcag
3001 aaaatgatga tatgtacagt ggcacacctt aaccagtcac taattttcac tgttgtgaaa
3061 gtgatttgat ttagaattaa acaaatggtt ttacattaca aaaaaaaaaa aaaaaaa
//