LOCUS BC025994 2220 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens solute carrier family 4, sodium bicarbonate
cotransporter, member 8, mRNA (cDNA clone MGC:26446 IMAGE:4822306),
complete cds.
ACCESSION BC025994
VERSION BC025994.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2220)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2220)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: d Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4759133.
FEATURES Location/Qualifiers
source 1..2220
/db_xref="H-InvDB:HIT000040057"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26446 IMAGE:4822306"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2220
/gene="SLC4A8"
/gene_synonym="NBC3"
/db_xref="GeneID:9498"
/db_xref="MIM:605024"
CDS 67..2142
/gene="SLC4A8"
/gene_synonym="NBC3"
/codon_start=1
/product="SLC4A8 protein"
/protein_id="AAH25994.1"
/db_xref="GeneID:9498"
/db_xref="MIM:605024"
/translation="MPAAGSNEPDGVLSYQRPDEEAVVDQGGTSTILNIHYEKEELEG
HRTLYVGVRMPLGRQSHRHHRTHGQKHRRRGRGKGASQGEEGLEALAHDTPSQRVQFI
LGTEEDEEHVPHELFTELDEICMKEGEDAEWKETARWLKFEEDVEDGGERWSKPYVAT
LSLHSLFELRSCLINGTVLLDMHANSIEEISDLILDQQELSSDLNDSMRVKVREALLK
KHHHQNEKKRNNLIPIVRSFAEVGKKQSDPHLMDKHGQTVSPQSVPTTNLEVKNGVNC
EHSPVDLSKVDLHFMKKIPTGAEASNVLVGEVDILDRPIVAFVRLSPAVLLSGLTEVP
IPTRFLFILLGPVGKGQQYHEIGRSMATIMTDEIFHDVAYKAKERDDLLAGIDEFLDQ
VTVLPPGEWDPSIRIEPPKNVPSQEKRKMPGVPNGNVCHIEQEPHGGHSGPELQRTGR
LFGGLVLDIKRKAPWYWSDYRDALSLQCLASFLFLYCACMSPVITFGGLLGEATEGRI
SAIESLFGASMTGIAYSLFAGQALTILGSTGPVLVFEKILFKFCKDYALSYLSLRACI
GLWTAFLCIVLVATDASSLVCYITRFTEEAFASLICIIFIYEAIEKLIHLAETYPIHM
HSQLDHLSLYYCRCTLPENPNNHTLQYWKDHNIVTAEVHWANLTVSVSLGAARCPSIV
TTGLGGTSK"
BASE COUNT 589 a 512 c 588 g 531 t
ORIGIN
1 gtcgagagcg gcgggctgct gatgcttggc ttggagcccg tgggggagac ctagttcggc
61 tccgccatgc cggccgccgg gagtaacgag ccggacggcg tcctcagcta tcagagacca
121 gatgaagaag ctgtggtgga tcagggtggg accagtacaa ttctcaacat tcactatgaa
181 aaagaagagc tggaaggtca cagaactctg tatgtgggag ttcggatgcc gcttggccgg
241 cagagccatc ggcatcaccg cactcatggc cagaagcacc ggagacgagg gcggggcaaa
301 ggagccagcc agggggagga aggcctggaa gccctggccc acgacacacc atctcagcgt
361 gttcagttca ttcttggcac cgaggaagat gaagagcatg tgcctcatga gctgtttaca
421 gagctggatg agatctgtat gaaagaggga gaagatgctg agtggaagga aacagccagg
481 tggctgaagt ttgaagaaga tgttgaagat gggggagaac gctggagcaa gccttatgtg
541 gcaacccttt cattgcacag cctgtttgag ctaaggagct gccttattaa tggaacagtc
601 ctcctggata tgcatgcaaa tagcatagaa gaaatttcag acctgatcct ggatcagcaa
661 gaactgtcca gtgacctgaa tgacagcatg agggttaaag tgcgggaagc ccttctcaaa
721 aagcatcatc atcagaatga aaagaagaga aacaacctca ttcccattgt tcgctccttt
781 gctgaggttg gcaagaagca gtctgatcct catttgatgg ataaacatgg tcaaaccgtg
841 tctcctcagt ctgttccaac tacaaatctt gaagtaaaaa atggagtgaa ttgtgaacat
901 agtcctgtgg atttaagcaa ggtagacctt catttcatga aaaaaattcc tactggggcc
961 gaggcctcca atgtcctggt tggagaggtg gatattttgg accgtcccat tgttgccttt
1021 gtgaggctgt ctccagctgt tcttctctca ggcctaacag aagtgccaat cccaacaaga
1081 tttttgttta tcttattggg tccagtaggg aaaggtcagc agtaccatga gattggcaga
1141 tccatggcca ccatcatgac agatgagatt tttcatgacg tagcatataa ggcaaaagag
1201 cgagatgatc tcctggcggg gattgatgag ttcctagacc aggtgacggt gctccctcca
1261 ggagagtggg atccctccat tagaattgag ccacccaaaa atgtcccttc ccaggagaaa
1321 aggaaaatgc ctggagttcc aaatggaaat gtttgccaca tagaacagga accacatggg
1381 ggtcacagtg ggccagaact tcagcgcact gggcggctat ttgggggctt ggtgctggac
1441 atcaagcgga aggccccctg gtactggagc gactaccgag atgcactcag cttacagtgt
1501 ttggcttcct ttctgttcct gtactgtgcc tgcatgtcac ctgtcatcac ctttggggga
1561 ctgcttggag aagccactga gggacgcata agtgcaattg aatccttgtt tggagcttcc
1621 atgactggga ttgcttattc cttgtttgcg ggacaggctc tcaccatcct gggaagtact
1681 ggaccagtgc ttgtgtttga aaagattttg ttcaaattct gcaaagacta tgctctttca
1741 tacctctccc tgcgagcttg tattggactg tggaccgctt tcctgtgtat tgtccttgtg
1801 gcaactgatg ccagttccct tgtctgctac attacccgtt tcactgaaga agcatttgcc
1861 tccctaattt gcattatttt catctatgaa gcaatagaaa aactgattca cctggcagag
1921 acctacccca tccacatgca cagccagctg gaccacctta gcctctatta ctgcaggtgt
1981 actctgccag agaatccaaa caatcacacc ctccagtact ggaaggacca caacatcgtg
2041 acagcagaag tccactgggc taacctgact gtcagtgtaa gtctgggagc tgccagatgt
2101 cctagcattg tgaccacagg tttaggaggg acttctaagt gaaggggagg agtagccctt
2161 tggccaaact ctggcattta ccgaaataaa gctttttaaa aaacaaaaaa aaaaaaaaaa
//