LOCUS BC025992 2184 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens unc-50 homolog (C. elegans), mRNA (cDNA clone
MGC:26277 IMAGE:4830706), complete cds.
ACCESSION BC025992
VERSION BC025992.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2184)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2184)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC025992.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 34 Row: i Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059764.
FEATURES Location/Qualifiers
source 1..2184
/db_xref="H-InvDB:HIT000050897"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26277 IMAGE:4830706"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2184
/gene="UNC50"
/gene_synonym="DKFZp564G0222"
/gene_synonym="GMH1"
/gene_synonym="hGMH1p"
/gene_synonym="HSD23"
/gene_synonym="UNCL"
/gene_synonym="URP"
/db_xref="GeneID:25972"
/db_xref="HGNC:HGNC:16046"
CDS 1181..1960
/gene="UNC50"
/gene_synonym="DKFZp564G0222"
/gene_synonym="GMH1"
/gene_synonym="hGMH1p"
/gene_synonym="HSD23"
/gene_synonym="UNCL"
/gene_synonym="URP"
/codon_start=1
/product="unc-50 homolog (C. elegans)"
/protein_id="AAH25992.1"
/db_xref="GeneID:25972"
/db_xref="HGNC:HGNC:16046"
/translation="MLPSTSVNSLVQGNGVLNSRDAARHTAGAKRYKYLRRLFRFRQM
DFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFLVLLSIWLCVSTIGFGFV
LDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQSRDYDVEWGYAFDVH
LNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYYIYVTFLGYSALPF
LKNTVILLYPFAPLILLYGLSLALGWNFTHTLCSFYKYRVK"
BASE COUNT 522 a 476 c 565 g 621 t
ORIGIN
1 ggcggaagtc ggttcccgtg acgcggcgcg ccccaagggc cggctccgtt gagggaaggg
61 agcccgcccg gtggcggctg gggtcggctg ctgggaggag gtggtgggct ggttcggacg
121 tgggtcgagg ctgtagcagg actccaggtg aggcctgagg accactctgc cctcccgcgg
181 cccgggctcg cgccgggggc catttaatcc cgacagcttg cggcctgacg tcgctgcggc
241 ctggcagtga ccacgtcggc gtccggcccc tcggccggcg atagagttgc ggctaaaatg
301 aaaggacgcc cagttacatt tgcatcgtag ataaagaaag agcatttagt ataagcatgt
361 ccgaaatgtt gcgtgggatg taggcatact aaaaccttat tcgtggcctg tctgaaatcc
421 aaatggagct gggtattctg tgtttttatt tgctaaatct ggcagccgta cccgcggccc
481 cgggcaggga gggagcagct gggctcggcc agaccctgcc ggcgtctggg gggcctgcga
541 agtggagggg agacgggcag ccgggcagtg gccggcgttc cccggagctc ggaccggttg
601 gattggactc cgacgctacc gctccctctg ctgaactatt ccggatgtaa aacactaggg
661 atcggagttt ttcttggttt tttaatctca ttctagtgac cgagaagctt gctggcagtg
721 cgctgatgga tctgtgtgaa taggccattt atttgacctc ttcagtaaca ctgttctaac
781 cggctgaaac tgctttctta ggcattttct taaaagcttg gtggttaaga gcacggaatt
841 tcgagtcaga tttccaatct tggctctatc actatcctcg gagtcatggg gcagtcacat
901 catccctgtc tctgtaatgg tagctgcccc tggataagtg ttattaggtg attcagaagg
961 gtgggctgtt gcccttgcct gaggttgcag tctgcggttc ccaagcccca agacccgcct
1021 cagaactaac tgcatttgct tttgactcct ggcctttctc tagggttggg aagaacatgg
1081 aaagtgacct ccctgccaaa taactcagaa gaggagtgtc ggtagccaaa tgtttcttca
1141 gaatacgtgt aaaagaaatg tttttcttcc atctaggaag atgttaccga gtacttcagt
1201 gaattcctta gtgcagggga acggagtctt gaattccagg gatgcggcaa gacacacagc
1261 cggagcgaaa cgctacaaat atctgagaag gcttttccgc tttcggcaaa tggactttga
1321 atttgctgcc tggcagatgc tctacctgtt cacatcccca cagagagttt acagaaattt
1381 tcattatcga aaacagacga aggaccagtg ggccagagat gaccctgctt tcttggtcct
1441 gttaagtatc tggctctgtg tgtccactat aggatttggc tttgtgctgg acatgggatt
1501 ctttgagaca ataaagcttc tcctttgggt tgtactcata gattgtgtag gcgttggtct
1561 tctgatagca actttaatgt ggttcatctc taacaagtat ttagtgaaac gacagagcag
1621 agactatgat gtggaatggg gctatgcttt tgatgtgcat ctcaatgctt tttatccact
1681 cctggtcatt ttgcatttta tccagctttt tttcatcaac catgttatcc tgacagacac
1741 atttattgga tatttagttg gaaatacctt atggttggtt gcagttggct attatatcta
1801 tgtaactttc ctgggataca gtgcattgcc atttttgaaa aatacagtaa ttcttctgta
1861 tccatttgca cctctgattc tgctctacgg gctttccctg gcactgggat ggaacttcac
1921 ccatactctc tgttctttct ataagtacag agtgaaataa aaagtgagaa gaagattcaa
1981 tcgtaactgt gtcaacagta ttgtgaagtg atcatttctt gtaaaacttg taaataaact
2041 atcatctttg tagatatctt aaaggtgtaa agtttgcaaa tttgaagaaa tatatattaa
2101 cactgtggtc aggtacattc cttaaaacta attaaatgta catttctata ataaatattt
2161 tttaaactaa aaaaaaaaaa aaaa
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