LOCUS BC025977 2794 bp mRNA linear HUM 06-JAN-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2O, mRNA (cDNA clone
IMAGE:3830235), partial cds.
ACCESSION BC025977
VERSION BC025977.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2794)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2794)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: m Column: 24.
FEATURES Location/Qualifiers
source 1..2794
/db_xref="H-InvDB:HIT000258984"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3830235"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2794
/gene="UBE2O"
/gene_synonym="E2-230K"
/gene_synonym="FLJ12878"
/gene_synonym="KIAA1734"
/db_xref="GeneID:63893"
/db_xref="HGNC:HGNC:29554"
/db_xref="IMGT/GENE-DB:29554"
/db_xref="MIM:29554"
CDS <1..1343
/gene="UBE2O"
/gene_synonym="E2-230K"
/gene_synonym="FLJ12878"
/gene_synonym="KIAA1734"
/codon_start=3
/product="UBE2O protein"
/protein_id="AAH25977.1"
/db_xref="GeneID:63893"
/db_xref="HGNC:HGNC:29554"
/db_xref="IMGT/GENE-DB:29554"
/db_xref="MIM:29554"
/translation="HEGEKKFLDDIKKLQENLKKTLDNVAIVEEEKMEAVPDVERKED
KPEGQSPVKAEWPSETPVLCQQCGGKPGVTFTSAKGEVFSVLEFAPSNHSFKKIEFQP
PEAKKFFSTVRKEMALLATSLPEGIMVKTFEDRMDLFSALIKGPTRTPYEDGLYLFDI
QLPNIYPAVPPHFCYLSQCSGRLNPNLYDNGKVCVSLLGTWIGKGTERWTSKSSLLQV
LISIQGLILVNEPYYNEAGFDSDRGLQEGYENSRCYNEMALIRVVQSMTQLVRRPPEV
FEQEIRQHFSTGGWRLVNRIDSWLETHALLEKAQALPNGVPKASSSPEPPAVAELSDS
GQQEPEDGGPAPGEASQGSDSEGGAQGLASASRDHTDQTSETAPDASVPPSVKPKKRR
KSYRSFLPEKSGYPDIGFPLFPLSKGFIKSIRGVLTQFRAALLEAGMPECTEDK"
BASE COUNT 674 a 791 c 768 g 561 t
ORIGIN
1 ggcacgaggg ggagaagaag tttctggatg acatcaagaa gctacaggaa aacctcaaga
61 agaccctgga caatgtggcc attgtagagg aggagaagat ggaagcagtg cccgacgtag
121 agcgcaagga ggacaagccc gaggggcagt cacctgtgaa ggctgagtgg cccagcgaaa
181 ccccggtgct gtgccagcag tgtggcggca agcctggcgt caccttcacc agcgccaagg
241 gcgaggtctt ctccgtactg gagtttgcac cctcaaatca ttcttttaag aaaattgagt
301 tccagcctcc agaagccaag aagttcttca gcacagtgcg gaaggagatg gcgctgctgg
361 ctacctcact gcctgagggc atcatggtca agacttttga agatagaatg gacctcttct
421 cagctctcat caagggcccc actcgaaccc cctacgagga tggcctctac ttgtttgaca
481 tccagctccc caacatctac ccagccgtgc ccccccactt ctgctacctc tcccaatgca
541 gtggccgcct gaaccccaac ctgtatgaca atgggaaggt gtgtgtcagc ctcctgggca
601 cctggattgg aaaggggaca gagaggtgga caagcaagtc cagccttctc caggtgctca
661 tctccatcca aggtctgatc ctggtaaatg aaccatacta caacgaagcc ggcttcgaca
721 gtgaccgagg cctgcaggaa ggctatgaaa acagtcgctg ttacaatgag atggcgctga
781 tccgcgtggt gcagtccatg acccagctgg tgcggcggcc ccccgaggtc tttgagcagg
841 agatcaggca acactttagc actggtggct ggcggctggt gaaccgtatc gattcctggc
901 tggaaaccca tgccctgctg gagaaggccc aggcactgcc caacggggtg cccaaggcca
961 gcagctcgcc agagccccca gctgtagccg agctgtcaga ctccggccaa caagaacctg
1021 aggatggagg gccagcccca ggagaggcct cccagggctc agactcagag ggcggtgccc
1081 agggcctggc ctcagctagc agggaccaca cagaccagac ttcggagacc gcaccagacg
1141 catcggtgcc acccagtgtg aaaccaaaga agcggagaaa gagctaccgg agcttcttac
1201 ctgagaagag tggctaccct gacatcggct tccccctctt cccactttcc aagggtttca
1261 tcaagagcat ccggggtgtc ctgacgcagt tccgggctgc cctgctagag gcaggcatgc
1321 cggagtgcac agaggacaag tagctgccag gcacagagga aagagcatca ccgtgggaga
1381 ggccagccgc cgcctgctca ctcccccccg gaatcacccc tcttcccatg cccctctgtc
1441 cccactgcaa acccactgcc ctcttctccc caaggtgagt ttgatgctga agtgcaagaa
1501 gtgtgttgag atgctgccgt ttctattttg aagcgagctt tcaacaggcg ggtcccctgt
1561 ggcaaagaaa atcggaaccc tgttgccgat tttccatttg tcaccccagc agaatgtccg
1621 gcacttgctc ccttgctgcc ccttctcagg tcagaggcgg gtgttccagg gcctgccgcg
1681 gggctctctg ggccggttcc ctgcagaccc gcaggagagc acatgtgcct tgcatgaagt
1741 gtgggttgcg ccaacaattc ccctggtccc tttcaacctg tttagttcaa ctcaagcctc
1801 cctgtgtccc agaccctcct gctgccacca ccacccaggt cctccctagt cctccagcgt
1861 caacactatc ccttgggagt tgtagctgct gtcactgact cccggctata catggcctgt
1921 cgaccacgtt atagccctca ggcctgttga acttgctctc taagagaggt tgggaccagg
1981 ctaggttccg ggtgacgccc aggagaggtg gtggccttca cacatgcaca tggagttgag
2041 gaccagggag ctgcagggaa agcaacagct ataggtgcct tgctcttctg tcggaggctg
2101 ctgggggcaa gagcagctgc acaaggccag ggcaagtgct agggcccctc ccccatcaca
2161 tggtcacact gggacaggcg tgcagctcac tgaactccaa gcgagccagc cctctcttgg
2221 actagaaggc ctactgtcag cccttcgctt acaaactgca ggctcaatcc gaaggggacg
2281 gccggcgggg gctctcctag tgcccagaga caggcccaga ggtttacaag ttttctaagc
2341 ttttgataat gtgaagctcc aggccgagag gatgctgttg agcacattgc agctatgtaa
2401 tttttggtgt atgtatgtaa tatttaaggt tggaaaaaaa actcaaaagc aaagatatta
2461 actcttatta gaaaaaaaga caaaaaaaaa gccaaagcat gatgcgtctt gtcagcctta
2521 agtgggctcc acacctgtgc tgtgctgtga ccgcccagcc agcagagctg cgggaggatg
2581 gagccggacc acacaccgtg gcatttggaa ccgagtcggt atcttgtttg agaaacaccc
2641 ggagtgactg gtggggctgt gcttcccagt gcattgtaca tgtggagatg tgaatgccta
2701 ctgcttacga tatctgtata aagtgctgtg tgattaaact tttttttact tgcaaaaaaa
2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//