LOCUS BC025963 1900 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain, mRNA (cDNA clone MGC:39242 IMAGE:4842286), complete cds. ACCESSION BC025963 VERSION BC025963.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1900) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1900) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: g Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4557232. FEATURES Location/Qualifiers source 1..1900 /db_xref="H-InvDB:HIT000040042" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39242 IMAGE:4842286" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1900 /gene="ACADS" /gene_synonym="ACAD3" /gene_synonym="SCAD" /db_xref="GeneID:35" /db_xref="HGNC:HGNC:90" /db_xref="MIM:606885" CDS 48..1286 /gene="ACADS" /gene_synonym="ACAD3" /gene_synonym="SCAD" /codon_start=1 /product="acyl-Coenzyme A dehydrogenase, C-2 to C-3 short chain" /protein_id="AAH25963.1" /db_xref="GeneID:35" /db_xref="HGNC:HGNC:90" /db_xref="MIM:606885" /translation="MAAALLARASGPARRALCPRAWRQLHTIYQSVELPETHQMLLQT CRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDYLAYAIAM EEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNG SDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKSISAFLVPMP TPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIA SQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAML KDNKKPFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYE GTSEIQRLVIAGHLLRSYRS" BASE COUNT 394 a 578 c 599 g 329 t ORIGIN 1 gcgctcgcag cgggaggtcg cgaagcctgg gactgtgtct gtcgcccatg gccgccgcgc 61 tgctcgcccg ggcctcgggc cctgcccgca gagctctctg tcctagggcc tggcggcagt 121 tacacaccat ctaccagtct gtggaactgc ccgagacaca ccagatgttg ctccagacat 181 gccgggactt tgccgagaag gagttgtttc ccattgcagc ccaggtggat aaggaacatc 241 tcttcccagc ggctcaggtg aagaagatgg gcgggcttgg gcttctggcc atggacgtgc 301 ccgaggagct tggcggtgct ggcctcgatt acctggccta cgccatcgcc atggaggaga 361 tcagccgcgg ctgcgcctcc accggagtca tcatgagtgt caacaactct ctctacctgg 421 ggcccatctt gaagtttggc tccaaggagc agaagcaggc gtgggtcacg cctttcacca 481 gtggtgacaa aattggctgc tttgccctca gcgaaccagg gaacggcagt gatgcaggag 541 ctgcgtccac caccgcccgg gccgagggcg actcatgggt tctgaatgga accaaagcct 601 ggatcaccaa tgcctgggag gcttcggctg ccgtggtctt tgccagcacg gacagagccc 661 tgcaaaacaa gagcatcagt gccttcctgg tccccatgcc aacgcctggg ctcacgttgg 721 ggaagaaaga agacaagctg ggcatccggg gctcatccac ggccaacctc atctttgagg 781 actgtcgcat ccccaaggac agcatcctgg gggagccagg gatgggcttc aagatagcca 841 tgcaaaccct ggacatgggc cgcatcggca tcgcctccca ggccctgggc attgcccaga 901 ccgccctcga ttgtgctgtg aactacgctg agaatcgcat ggccttcggg gcgcccctca 961 ccaagctcca ggtcatccag ttcaagttgg cagacatggc cctggccctg gagagtgccc 1021 ggctgctgac ctggcgtgct gccatgctga aggataacaa gaagcctttc atcaaggagg 1081 cagccatggc caagctggcc gcctcggagg ccgcgaccgc catcagccac caggccatcc 1141 agatcctggg cggcatgggc tacgtgacag agatgccggc agagcggcac taccgcgacg 1201 cccgcatcac tgagatctac gagggcacca gcgaaatcca gcggctggtg atcgccgggc 1261 atctgctcag gagctaccgg agctgagccc gcggcggact gccccacgac tgcgggaagg 1321 cgcgggagcc aggggcctcc accccaaccc cggctcagag actgggcggc ccggcggggg 1381 ctccctgggg accccagatg ggctcagtgc tgccacccag atcagatcac atgggaatga 1441 ggccctccga ccattggcag ctccgcctct gggcctttcc gcctcctcac cactgtgcct 1501 caagttcctc atctaagtgg ccctggcctc ctgggggcgg ggttgtgggg gggctgagcg 1561 acactcaggg acacctcagt tgtcctcccg cgggccctgg tgccctggca tgaaggccca 1621 gtgcgacagg cccttggtgg ggtctgtctt ttccttgagg tcagaggtca ggagcagggc 1681 tggggtcagg atgacgaggc ctggggtcct ggtgttgggc aggtggtggg gctgggccat 1741 ggagctggcc cagaggcccc tcagcccttt gtaaagtctg atgaaggcag gggtggtgat 1801 tcatgctgtg tggctgactg tgggtaataa acacacctgt cccccaaaaa aaaaaaaaaa 1861 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //