LOCUS BC025788 2083 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens NK2 transcription factor related, locus 3
(Drosophila), mRNA (cDNA clone MGC:34784 IMAGE:5229146), complete
cds.
ACCESSION BC025788
VERSION BC025788.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2083)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2083)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21699077.
FEATURES Location/Qualifiers
source 1..2083
/db_xref="H-InvDB:HIT000040027"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34784 IMAGE:5229146"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2083
/gene="NKX2-3"
/gene_synonym="NKX2.3"
/db_xref="GeneID:159296"
/db_xref="HGNC:HGNC:7836"
/db_xref="MIM:606727"
CDS 180..1061
/gene="NKX2-3"
/gene_synonym="NKX2.3"
/codon_start=1
/product="NK2 transcription factor related, locus 3
(Drosophila)"
/protein_id="AAH25788.1"
/db_xref="GeneID:159296"
/db_xref="HGNC:HGNC:7836"
/db_xref="MIM:606727"
/translation="MMLPSPVTSTPFSVKDILNLEQQHQHFHGAHLQADLEHHFHSAP
CMLAAAEGTQFSDGGEEDEEDEGEKLSYLNSLAAADGHGDSGLCPQGYVHTVLRDSCS
EPKEHEEEPEVVRDRSQKSCQLKKSLETAGDCKAAEESERPKPRSRRKPRVLFSQAQV
FELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKSLELGAHA
PPPPPRRVAVPVLVRDGKPCVTPSAQAYGAPYSVGASAYSYNSFPAYGYGNSAAGPPR
RPLPCSPPAARPEAAPL"
BASE COUNT 522 a 604 c 632 g 325 t
ORIGIN
1 caaaacccag acccccaggt cccggccaat ggaggcgatt tagactggag tgggaccgcg
61 tctgtcaaaa gcccgactcg gcagcagcgg cggagtccag gaggagagct ggagccgccg
121 cgctgcctcc ccgcccccgc cgggatttat tatttggact ggacaattaa gtggccctga
181 tgatgttacc aagcccggtc acctccaccc ctttctcagt caaagacatt ttgaatctgg
241 agcagcagca ccagcacttc catggtgcgc acttgcaggc ggacttggag caccacttcc
301 actctgcgcc ctgcatgctg gccgccgctg aggggacgca attttctgac ggaggggagg
361 aggacgagga agacgagggc gagaaattgt cctatttgaa ctcactagcc gcagcagacg
421 gccacgggga ttcagggctg tgtccccagg gctatgtcca cacggtcctg cgagactcgt
481 gcagcgagcc caaggaacat gaagaggagc ccgaggtcgt gagggaccgg agccaaaaaa
541 gctgccagct gaagaagtct ctagagacgg ccggagactg caaggcggcg gaggagagcg
601 agaggccgaa gccacgcagc cgccggaagc cccgggtcct cttctcgcaa gcccaggtct
661 tcgagctgga acgcaggttc aagcagcagc ggtacctgtc ggcacccgag cgcgagcacc
721 tcgccagcag cctgaagctc acatccactc aggtgaaaat ctggttccag aatcgcaggt
781 acaagtgcaa gagacagcgg caggacaagt ctctggagct tggcgcacac gcgcccccgc
841 cgccgccgcg ccgcgtggct gtcccggtgc tggtgcggga cggcaagccg tgcgtcacgc
901 ccagcgcgca ggcctacggc gcgccctaca gcgtgggcgc cagcgcctac tcctacaaca
961 gcttccccgc ctacggctat gggaactcgg cggcgggacc tccgcggcga ccactgccat
1021 gcagcccgcc tgcagcgcgg ccggaggcgg cccctttgtg aacgtgagca acctaggagg
1081 cttcggcagc ggcggcagcg cacagccgtt gcaccagggt actgcagccg gggccgcgtg
1141 cgctcagggc accttgcagg gcatccgggc ctggtaggga cggggcgggt cacgcggcgg
1201 gcaccccagc gcagcctggc gccgcgggac tgaagctcga gaagggcctg acctaaaggt
1261 caggtcccct cgttaaaaaa atatgtacgt ctagctcctc agggcttcgg atcgcagctc
1321 actcgaggcc tggggaaggg gactcagggg cgaggaggat gactgggtcc ggtcgccagg
1381 actgtctctg aggcagaaac gccggctggg cgccggggag gacgatggcc ccgaccctgg
1441 cagcgagagg agaccaggag gctaggaccc tggccgcgct tggttcttcc aaagcgagaa
1501 gggcttctct ccctctgcct ttccgcggcc tccgcgaagc gttggcgggg agcccaagga
1561 cataacaaat taaaagcatg aaggagagaa aaatgggggt cgtggcttga gaaattccag
1621 gccctaccga tcctctgccc cctttgcggg cctggagcgc catagcacag tcgatttcgt
1681 ttcgcagctg tctcccctcc gcagcagata cctcggtcca gatctccgga ttgtcggggg
1741 acgcaggact cttcgaggaa aaccagccga atgagatcaa aagttggggg tggggggagg
1801 ctgaacaaac tcaggacctg gtggcccacc ggaggtgtta ccgggtttcc tttctgtttc
1861 gtattctgta ttcagcacat gttatctatc tatctatcta tataactata accacacgcc
1921 gtgtagacac ccgctgccac acactacagg agtcaataaa caaggtgcaa tattttcaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaa
//