LOCUS BC025760 1954 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens stomatin (EPB72)-like 3, mRNA (cDNA clone MGC:34833
IMAGE:5204252), complete cds.
ACCESSION BC025760
VERSION BC025760.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1954)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1954)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21686994.
FEATURES Location/Qualifiers
source 1..1954
/db_xref="H-InvDB:HIT000040009"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34833 IMAGE:5204252"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1954
/gene="STOML3"
/gene_synonym="Epb7.2l"
/gene_synonym="SRO"
/db_xref="GeneID:161003"
/db_xref="HGNC:HGNC:19420"
/db_xref="MIM:608327"
CDS 126..1001
/gene="STOML3"
/gene_synonym="Epb7.2l"
/gene_synonym="SRO"
/codon_start=1
/product="stomatin (EPB72)-like 3"
/protein_id="AAH25760.1"
/db_xref="GeneID:161003"
/db_xref="HGNC:HGNC:19420"
/db_xref="MIM:608327"
/translation="MDSRVSSPEKQDKENFVGVNNKRLGVCGWILFSLSFLLVIITFP
ISIWMCLKIIKEYERAVVFRLGRIQADKAKGPGLILVLPCIDVFVKVDLRTVTCNIPP
QEILTRDSVTTQVDGVVYYRIYSAVSAVANVNDVHQATFLLAQTTLRNVLGTQTLSQI
LAGREEIAHSIQTLLDDATELWGIRVARVEIKDVRIPVQLQRSMAAEAEATREARAKV
LAAEGEMNASKSLKSASMVLAESPIALQLRYLQTLSTVATEKNSTIVFPLPMNILEGI
GGVSYDNHKKLPNKA"
BASE COUNT 593 a 428 c 419 g 514 t
ORIGIN
1 gtctttcact ctctcatact ttctcctctc ccctctccca agcacatctg agttgctgcc
61 tgttcttcac acttagctcc aaacccatga aaaattgcca agtataaaag cttctcaaga
121 atgagatgga ttctagggtg tcttcacctg agaagcaaga taaagagaat ttcgtgggtg
181 tcaacaataa acggcttggt gtatgtggct ggatcctgtt ttccctctct ttcctgttgg
241 tgatcattac cttccccatc tccatatgga tgtgcttgaa gatcattaag gagtatgaac
301 gtgctgttgt attccgtctg ggacgcatcc aagctgacaa agccaagggg ccaggtttga
361 tcctggtcct gccatgcata gatgtgtttg tcaaagttga cctccgaaca gttacttgca
421 acattcctcc acaagagatc ctcaccagag actccgtaac tactcaggta gatggagttg
481 tctattacag aatctatagt gctgtctcag cagtggctaa tgtcaacgat gtccatcaag
541 caacatttct gctggctcaa accactctga gaaatgtctt agggacacag accttgtccc
601 agatcttagc tggacgagaa gagatcgccc atagcatcca gactttactt gatgatgcca
661 ccgaactgtg ggggatccgg gtggcccgag tggaaatcaa agatgttcgg attcccgtgc
721 agttgcagag atccatggca gccgaggctg aggccacccg ggaagcgaga gccaaggtcc
781 ttgcagctga aggagaaatg aatgcttcca aatccctgaa gtcagcctcc atggtgctgg
841 ctgagtctcc catagctctc cagctgcgct acctgcagac cttgagcacg gtagccaccg
901 agaagaattc tacgattgtg tttcctctgc ccatgaatat actagagggc attggtggcg
961 tcagctatga taaccacaag aagcttccaa ataaagcctg aggtcctctt gcggtagtca
1021 gctattgcat agagagtggt gtctattcct atggagaagc cagtagttag aaacggtgag
1081 aattccaaca ctgttcatgt aacagtaact ccatagatgg aagagcattg gcaggaaaaa
1141 gctctagagg ctatacagag aagaaaaaaa gagcaaaaat gagacctgta tattactttt
1201 atttttagga ccataatcaa ctttgtaata ttcttatata attaattagt ggtggtctcc
1261 gactttatag caggaacttt ctggtagtat gagaagaaat cattgggtga ctatgactaa
1321 tgtttcagaa ttacttttta attgttttaa aaagcactcc agataattta taagtaacat
1381 aggcctcata tttacactat atgttcgctt tataattccg aagttgttat ttgctaaatc
1441 tccaatggtt gcaatcaaac cccacaatgc tgaaaacaga gattgatttt gatgttaaga
1501 acaaaagaag tatggaaact tccaggctta aacatgtccc ccgtgccaca aggcaaactg
1561 cgatgagctc acagtccagg tctcttgctg tgtgtcctgc agggagtggc caactctcca
1621 ccttccagca ccattatcag agggtgggaa aaggcacatg aaagtggcca gctcctgtca
1681 atttatttgc ttacaaggga gaatgcttgg aaaggttgca ttggttgaaa ccactgagga
1741 gcatcaccct ggggatttca tgttttcact ctgttcttag tcccaggagc cacaggtaat
1801 cgagaatgtt tgtgaactct atccacatcc cctcccccac ctgccaaata acctgttcaa
1861 aacaaagaag gcatagaata taaatgaatt tcaaaagtta aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
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