LOCUS BC025663 2421 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens patatin-like phospholipase domain containing 7, mRNA
(cDNA clone IMAGE:5199366), partial cds.
ACCESSION BC025663
VERSION BC025663.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2421)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2421)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: a Column: 17.
FEATURES Location/Qualifiers
source 1..2421
/db_xref="H-InvDB:HIT000091089"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5199366"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2421
/gene="PNPLA7"
/gene_synonym="FLJ31318"
/gene_synonym="FLJ43070"
/gene_synonym="FLJ44279"
/gene_synonym="NTEL1"
/gene_synonym="RP11-48C7.2"
/db_xref="GeneID:375775"
/db_xref="HGNC:HGNC:24768"
CDS <1..1893
/gene="PNPLA7"
/gene_synonym="FLJ31318"
/gene_synonym="FLJ43070"
/gene_synonym="FLJ44279"
/gene_synonym="NTEL1"
/gene_synonym="RP11-48C7.2"
/codon_start=1
/product="PNPLA7 protein"
/protein_id="AAH25663.1"
/db_xref="GeneID:375775"
/db_xref="HGNC:HGNC:24768"
/translation="RLIHLLGEKILGSLQQGPVTGHQLGLPTEGSKWDLGNPAVNLST
VAVMPVSEEVPLTAFALELEHALSAIGPTLLLTSDNIKRRLGSAALDSVHEYRLSSWL
GQQEDTHRIVLYQADGTLTPWTQRCVRQADCILIVGLGDQEPTVGELERMLESTAVRA
QKQLILLHREEGPAPARTVEWLNMRSWCSGHLHLCCPRRVFSRRSLPKLVEMYKHVFQ
RPLDRHSDFSRLARVLTGNAIALVLGGGGARGCAQVGVLKALAECGIPVDMVGGTSIG
AFVGALYSEERNYSQMRIRAKQWAEGMTSLMKAALDLTYPITSMFSGAGFNSSIFSVF
KDQQIEDLWIPYFAITTDITASAMRVHTDGSLWRYVRASMSLSGYMPPLCDPKDGHLL
MDGGYINNLPADVARSMGAKVVIAIDVGSRDETDLTNYGDALSGWWLLWKRWNPLATK
VKVLNMAEIQTRLAYVCCVRQLEVVKSSDYCEYLRPPIDSYSTLDFGKFNEICEVGYQ
HGRTVFDIWGRSGVLEKMLRDQQGPSKKPASAVLTCPNASFTDLAEIVSRIEPAKPAM
VDDESDYQTEYEEELLDVPRDAYADFQSTSAQQGSDLEDESSLRHRHPSLAFPKLSEG
SSDQDG"
BASE COUNT 511 a 743 c 741 g 426 t
ORIGIN
1 cggctgattc atctcttggg tgagaagatc ctgggcagcc tccagcaggg acctgtgaca
61 ggccaccagc ttgggctccc cacggagggc agcaagtggg acttggggaa cccggctgtc
121 aacctgtcca cggtggcagt gatgcccgtg tcagaggaag tgcccctcac cgccttcgcc
181 ctggagctgg agcatgccct cagcgccatc ggcccgaccc tgctgctgac tagtgacaac
241 ataaaacggc gccttggctc cgctgccctg gacagtgttc acgagtaccg gctgtccagc
301 tggctggggc agcaggagga cacccacagg atcgtgctct accaggcaga tggcacgctc
361 acaccctgga cccagcgctg cgtgcgccag gccgactgca tcctcatcgt gggcctgggt
421 gaccaggagc ccacagtggg cgagctggag cggatgctgg agagcacagc tgtgcgtgcc
481 cagaagcagc tgatcctgct gcacagggag gagggcccgg cgccagcgcg caccgtggag
541 tggctcaaca tgcggagctg gtgctccggc cacctgcacc tctgctgccc gcgccgcgtc
601 ttctccagga ggagcctgcc caagctggtg gagatgtaca agcatgtctt ccagcggccc
661 ctggaccgac actcagactt ctcccgcctg gcgagggtgc tgacgggcaa cgccattgcc
721 ctggtgcttg ggggaggggg agcaagaggc tgtgcccagg tgggcgttct caaggccttg
781 gcggagtgcg gcatccctgt ggacatggtg ggaggcacgt ccatcggggc cttcgtgggt
841 gccctgtact ctgaggagcg gaactacagc cagatgcgga tccgggccaa gcagtgggcc
901 gagggcatga cgtccttgat gaaggccgcg ctggacctca cctaccccat cacgtccatg
961 ttctccggag ccggcttcaa cagcagcatc ttcagcgtct tcaaggacca gcagatcgag
1021 gacctgtgga ttccttattt cgccatcacc accgacatca cagcctcggc catgcgggtc
1081 cacaccgacg gctccctgtg gcggtacgtg cgtgccagca tgtccctgtc cggttacatg
1141 ccccctctct gtgacccgaa ggacggacac ctgctgatgg acgggggcta catcaacaac
1201 ctcccagcgg atgtggcccg gtccatgggg gcaaaagtgg tgatcgccat tgacgtgggc
1261 agccgagatg agacggacct caccaactat ggggatgcgc tgtctgggtg gtggctgctg
1321 tggaaacgct ggaacccctt ggccacgaaa gtcaaggtgt tgaacatggc agagattcag
1381 acgcgcctgg cctacgtgtg ttgcgtgcgg cagctggagg tggtgaagag cagtgactac
1441 tgcgagtacc tgcgcccccc catcgacagc tacagcaccc tggacttcgg caagttcaac
1501 gagatctgcg aagtgggcta ccagcacggg cgcacggtgt ttgacatctg gggccgcagc
1561 ggcgtgctgg agaagatgct gcgcgaccag caggggccga gcaagaagcc cgcgagtgcg
1621 gtcctcacct gtcccaacgc ctccttcacg gaccttgccg aaattgtgtc tcgcattgag
1681 cccgccaagc ccgccatggt ggatgacgaa tctgactacc agacggagta cgaggaggag
1741 ctgctggacg tccccaggga tgcatacgca gacttccaga gcacctcagc ccagcagggc
1801 tcagacttgg aggacgagtc ctcactgcgg catcgacacc ccagtctggc tttcccaaaa
1861 ctgtctgagg gctcctctga ccaggacggg tagaggcctc tgctaaagag cccggatgca
1921 gcgtcttccg tgggactgtc cccaaggctg aggctcctgc caagtcctag gggcctctgt
1981 acctgccctg ctggaagccc tgacttcccc ggggccccag gctgtgttag ggttctctgg
2041 gcctcttctt tgtaccagca gccctgcata cagggccctg tgagcccccc tgcagtcctg
2101 tgaggcccct gaagctctgt gaggcccctg aagctctgtg aaccccctgc agccctgtga
2161 ggccccccga agccctgtga ggccccccga agccctgtga accacctgct gccctgtgag
2221 gcccccaaag ccctgtgaac tgcctgctgt cctgtgaact gcctgctgcc ctgtgaggtg
2281 tgggagccct gatgctgccg tgtgatgttt caataaaggt ggatctcact gttaaaaaaa
2341 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2401 aaaaaaaaaa aaaaaaaaaa a
//