LOCUS BC025423 4025 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens zinc finger and AT hook domain containing, mRNA (cDNA
clone IMAGE:4872579), partial cds.
ACCESSION BC025423
VERSION BC025423.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4025)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4025)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC025423.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: h Column: 2.
FEATURES Location/Qualifiers
source 1..4025
/db_xref="H-InvDB:HIT000091085"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4872579"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..4025
/gene="ZFAT"
/gene_synonym="AITD3"
/db_xref="GeneID:57623"
/db_xref="HGNC:HGNC:19899"
/db_xref="MIM:610931"
CDS <1..3510
/gene="ZFAT"
/gene_synonym="AITD3"
/codon_start=1
/product="ZFAT protein"
/protein_id="AAH25423.1"
/db_xref="GeneID:57623"
/db_xref="HGNC:HGNC:19899"
/db_xref="MIM:610931"
/translation="GRPKGSTKKSSTEEELAENIVSPTEDSPLAPEEGNSLPPSSLEC
SKCCRKFSNTRQLRKHICIIVLNLGEEEGEAGNESDLELEKKCKEDDREKASKRPRSQ
KTEKVQKISGKEARQLSGAKKPIISVVLTAHEAIPGATKIVPVEAGPPETGATNSETT
SADLVPRRGYQEYAIQQTPYEQPMKSSRLGPTQLKIFTCEYCNKVFKFKHSLQAHLRI
HTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFTCLSKGHLKVHIERVHK
KIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELCLMTREGKRQLLYDCHI
CERKFKNELDRDRHMLVHGDKWPFACELCGHGATKYQALELHVRKHPFVYVCAVCRKK
FVSSIRLRTHIKEVHGAAQEALVFTSSINQSFCLLEPGGDIQQEALGDQLQLVEEEFA
LQGVNALKEEACPGDTQLEEGRKEPEAPGEMPAPAVHLASPQAESTALPPCELETTVV
SSSDLHSQEVVSDDFLLKNDTSSAEAHAAPEKPPDMQHRSSVQTQGEVITLLLSKAQS
AGSDQESHGAQSPLGEGQNMAVLSAGDPDPSRCLRSNPAEASDLLPPVAGGGDTITHQ
PDSCKAAPEHRSGITAFMKVLNSLQKKQMNTSLCERIRKVYGDLECEYCGKLFWYQVH
FDMHVRTHTREHLYYCSQCHYSSITKNCLKRHVIQKHSNILLKCPTDGCDYSTPDKYK
LQAHLKVHTALDKRSYSCPVCEKSFSEDRLIKSHIKTNHPEVSMSTISEVLGRRVQLK
GLIGKRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLCEYATRSKSNLKAHMNR
HSTEKTHLCDMCGKKFKSKGTLKSHKLLHTADGKQFKCTVCDYTAAQKPQLLRHMEQH
VSFKPFRCAHCHYSCNISGSLKRHYNRKHPNEEYANVGTGELAAEVLIQQGGLKCPVC
SFVYGTKWEFNRHLKNKHGLKVVEIDGDPKWETATEAPEEPSTQYLHITEAEEDVQGT
QAAVAALQDLRYTSESGDRLDPTAVNILQQIIELGAETHDATALASVVAMAPGTVTVV
KQVTEEEPSSNHTVMIQETVQQASVELAEQHHLVVSSDDVEGIETVTVYTQGGEASEF
IVYVQEAMQPVEEQAVEQPAQEL"
BASE COUNT 1058 a 1143 c 1060 g 764 t
ORIGIN
1 ggcaggccta aggggtccac gaagaagtcc agcacagaag aggagctggc agaaaacatc
61 gtgagtccga ctgaggacag cccgctggct ccggaggaag ggaacagcct gcctccaagc
121 agcttggagt gtagcaagtg ctgtcggaag ttctccaaca cgcgccagct gcggaagcac
181 atctgcatta tcgtgctgaa tttgggtgag gaggaaggag aagcaggtaa cgagtctgac
241 cttgaactag aaaagaagtg taaggaagat gatcgggaaa aagcctcgaa aagaccacgg
301 tcacagaaaa cagagaaagt ccagaagatc tcaggaaagg aggccagaca gctttctggg
361 gcgaagaaac ccatcataag tgtggtttta actgcacacg aagcaattcc aggtgctacc
421 aagattgtgc cagtggaggc tgggccccct gaaacaggag ctacaaattc tgagaccact
481 tcagcagacc tggtgcctcg gagaggctac caggaatacg ccattcagca gacaccttat
541 gagcaaccaa tgaagtcaag caggctaggt cccactcagc tcaaaatctt cacttgtgaa
601 tactgcaaca aggtcttcaa gttcaagcac tcgctgcagg cccacctgag gatccacacc
661 aatgaaaagc catacaagtg cccccagtgc agctatgcca gtgccatcaa ggccaacctc
721 aatgtgcacc tgcgcaagca cactggagag aagttcgcct gcgactattg ctcgttcacc
781 tgcctgagca agggccacct caaggtgcac atcgagcgag tgcacaagaa gatcaagcag
841 cactgccgct tctgcaagaa gaagtactct gacgtcaaga acctcatcaa gcacatccga
901 gacgcgcatg acccacagga caagaaggtc aaagaggcct tggacgagct ctgcctgatg
961 acgagggagg gcaagcggca gctgctctat gactgccaca tctgtgagcg caagttcaag
1021 aacgagctgg accgcgaccg ccatatgctg gtccacggag acaagtggcc ttttgcctgt
1081 gagctctgtg gccatggggc caccaagtac caggcgctgg aactgcatgt caggaagcac
1141 cccttcgtgt acgtctgtgc cgtctgccgc aagaagttcg tcagctccat caggctgcgc
1201 acccacatca aagaggtgca cggggctgcc caggaggcct tggtcttcac cagttccatc
1261 aaccagagct tctgcctcct ggaacctggt ggggacatcc agcaagaagc tctgggggac
1321 cagctacagc tggtggaaga ggagtttgcc ctccagggcg tgaatgcact caaggaagag
1381 gcctgtcctg gggacactca gctggaggag ggccggaagg agccggaggc ccctggggaa
1441 atgcctgccc cagctgtgca cctggcctcc ccgcaggccg aaagcacagc cctgccaccc
1501 tgtgagctgg aaaccaccgt ggtctcctcc tcagacctgc attctcaaga ggtggtttca
1561 gatgattttt tgttgaaaaa tgatacctcc tccgcagagg ctcatgctgc tcctgagaag
1621 cccccagaca tgcagcacag aagctcagtc cagacgcaag gtgaagtgat cacactactg
1681 ctgtccaagg cccagagtgc tgggtcagat caggaaagcc atggcgccca gagcccccta
1741 ggggaagggc agaacatggc tgtgctttca gctggtgacc cagatcccag caggtgtctc
1801 aggtcaaacc cagctgaggc ctcagacctc ctccctccag tagctggtgg tggggacacc
1861 atcacacatc agcctgactc ttgcaaagct gcccctgagc accggtcagg catcaccgct
1921 ttcatgaagg tcctgaacag tttacagaag aagcaaatga acaccagctt gtgtgagcgg
1981 atccggaagg tttatggaga cctggagtgt gaatactgtg gcaaactttt ttggtaccaa
2041 gtgcattttg atatgcatgt ccgcacccac acccgggaac atctgtatta ttgctctcag
2101 tgtcattatt cttccatcac caaaaactgc cttaaacgcc acgtaattca gaaacacagt
2161 aacatcttgc tgaagtgtcc caccgacggc tgtgactact caactccaga taaatataag
2221 ctacaggcac atcttaaagt tcacacagca ctggacaaaa ggagttattc ttgtcctgtt
2281 tgtgaaaagt ctttttcaga ggatcgattg ataaagtcac atatcaagac caaccatcct
2341 gaggtctcca tgagcaccat ttctgaggtt ctcgggagga gggttcagct gaaagggcta
2401 attggaaaga gagccatgaa atgcccatat tgtgactttt atttcatgaa gaatggctca
2461 gaccttcagc gtcatatttg ggctcatgaa ggtgtgaagc ccttcaagtg ttctttgtgt
2521 gagtatgcaa ctcgtagcaa gagtaacctc aaggctcata tgaatcgtca cagcactgag
2581 aaaacccacc tatgtgacat gtgtggcaag aaattcaaat caaaagggac actgaaaagt
2641 cacaaactcc ttcacactgc agatgggaag cagtttaagt gcacggtgtg tgactacaca
2701 gcggcccaga agccacagct gctgcggcac atggaacagc atgtctcctt caagcctttc
2761 cgctgtgccc attgccatta ctcctgcaac atatctggct ctctgaagcg gcactacaac
2821 aggaagcacc ctaatgagga gtatgccaac gtgggcaccg gggagctggc agcggaggtg
2881 ctcatccagc aaggtggttt gaagtgtcct gtttgcagct ttgtatatgg caccaaatgg
2941 gagttcaata ggcacttgaa gaacaaacat ggcttgaagg tggtggaaat tgatggagac
3001 cccaagtggg agacagcaac agaagctcct gaggagccct ccacccagta tctccacatc
3061 acagaggccg aagaagacgt tcaagggaca caggcagcgg tggccgcgct ccaggacctg
3121 agatacacct ctgagagtgg cgaccgactg gaccccacgg ccgtgaacat cctgcagcag
3181 atcattgagc tgggcgccga gacccatgac gccactgccc ttgcctcggt ggttgccatg
3241 gcaccaggga cggtgactgt ggttaagcag gtcaccgagg aggagcccag ctccaaccac
3301 acggtcatga tccaggagac ggtccagcaa gcgtccgtgg agcttgccga gcagcaccac
3361 ctggtggtgt cctccgacga cgtggagggc attgagacgg tgactgtcta cacgcagggc
3421 ggggaggcct cggagttcat cgtctacgtg caggaggcca tgcagcctgt ggaggagcag
3481 gctgtggagc agccggccca ggaactctag aggacatgtg gcatcggatg gccacagggc
3541 ggggctgcca ggctctgcag gcacccaggg tggggaggcc acccttcctg ccctacccgc
3601 agaatggtgc tctcctttgc cctccctgcc cagcagcctg ataggactct cctagtccaa
3661 cttggggtgg gcaaggcagt cagcatcacc agcaacacca caggaccctc accccagcat
3721 agacacacac cccctgaccc ttaccatctg cttcctgaaa gacttcagtg tcagctcccc
3781 tacacacacc ccacaccttc accccttgct tcaagattca aacagagact cccagtcccc
3841 ctcagcatct tccctgaatc acagccccag ctccttgacc cccacttatc cctctccata
3901 accccaccct tgcccacccc acccccaccc ccaccaaggg cgcaagagta gcggtccaag
3961 cctgcaactc atctttcatt aaaggcttct ctctcaccaa aaaaaaaaaa aaaaaaaaaa
4021 aaaaa
//