LOCUS BC025366 3245 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens pyridoxal-dependent decarboxylase domain containing 1,
mRNA (cDNA clone IMAGE:3939623), partial cds.
ACCESSION BC025366
VERSION BC025366.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3245)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3245)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC025366.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 14 Row: l Column: 24.
FEATURES Location/Qualifiers
source 1..3245
/db_xref="H-InvDB:HIT000091068"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3939623"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3245
/gene="PDXDC1"
/gene_synonym="LP8165"
/db_xref="GeneID:23042"
/db_xref="HGNC:HGNC:28995"
CDS <1..1790
/gene="PDXDC1"
/gene_synonym="LP8165"
/codon_start=3
/product="PDXDC1 protein"
/protein_id="AAH25366.2"
/db_xref="GeneID:23042"
/db_xref="HGNC:HGNC:28995"
/translation="LGLPFPCLCRVPCNTVFGSQHQMDVAFLEKLIKDDIERGRLPLL
LVANAGTAAVGHTDKIGRLKELCEQYGIWLHVEGVNLATLALGYVSSSVLAAAKCDSM
TMTPGPWLGLPAVPAVTLYKHDDPALTLVAGLTSNKPTDKLRALPLWLSLQYLGLDGF
VERIKHACQLSQRLQESLKKVNYIKILVEDELSSPVVVFRFFQELPGSDPVFKAVPVP
NMTPSGVGRERHSCDALNRWLGEQLKQLVPASGLTVMDLEAEGTCLRFSPLMTAAVLG
TRGEDVDQLVACIESKLPVLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRYEH
ANDDKSSLKSDPEGENIHAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDA
AELVETIAATAREIEENSRLLENMTEVVRKGIQEAQVELQKASEERLLEEGVLRQIPV
VGSVLNWFSPVQALQKGRTFNLTAGSLESTEPIYVYKAQGAGVTLPPTPSGSRTKQRL
PGQKPFKRSLRGSDALSETSSVSHIEDLEKVERLSSGPEQITLEASSTEGHPGAPSPQ
HTDQTEAFQKGVPHPEDDHSQVEGPESLR"
BASE COUNT 870 a 715 c 821 g 839 t
ORIGIN
1 agctcggctt gcccttcccc tgcttgtgcc gtgtaccctg taacactgtg tttggatccc
61 agcatcagat ggatgttgcc ttcctggaga aactgattaa agatgatata gagcgaggaa
121 gactgcccct gttgcttgtc gcaaatgcag gaacggcagc agtaggacac acagacaaga
181 ttgggagatt gaaagaactc tgtgagcagt atggcatatg gcttcatgtg gagggtgtga
241 atctggcaac attggctctg ggttatgtct cctcatcagt gctggctgca gccaaatgtg
301 atagcatgac gatgactcct ggcccgtggc tgggtttgcc agctgttcct gcggtgacac
361 tgtataaaca cgatgaccct gccttgactt tagttgctgg tcttacatca aataagccca
421 cagacaaact ccgtgccctg cctctgtggt tatctttaca atacttggga cttgatgggt
481 ttgtggagag gatcaagcat gcctgtcaac tgagtcaacg gttgcaggaa agtttgaaga
541 aagtgaatta catcaaaatc ttggtggaag atgagctcag ctccccagtg gtggtgttca
601 gatttttcca ggaattacca ggctcagatc cggtgtttaa agccgtccca gtgcccaaca
661 tgacaccttc aggagtcggc cgggagaggc actcgtgtga cgcgctgaat cgctggctgg
721 gagaacagct gaagcagctg gtgcctgcaa gcggcctcac agtcatggat ctggaagctg
781 agggcacgtg tttgcggttc agccctttga tgaccgcagc agttttagga actcggggag
841 aggatgtgga tcagctcgta gcctgcatag aaagcaaact gccagtgctg tgctgtacgc
901 tccagttgcg tgaagagttc aagcaggaag tggaagcaac agcaggtctc ctatatgttg
961 atgaccctaa ctggtctgga ataggggttg tcaggtatga acatgctaat gatgataaga
1021 gcagtttgaa atcagatccc gaaggggaaa acatccatgc tggactcctg aagaagttaa
1081 atgaactgga atctgaccta acctttaaaa taggccctga gtataagagc atgaagagct
1141 gcctttatgt cggcatggcg agcgacaacg tcgatgctgc tgagctcgtg gagaccattg
1201 cggccacagc ccgggagata gaggagaact cgaggcttct ggaaaacatg acagaagtgg
1261 ttcggaaagg cattcaggaa gctcaagtgg agctgcagaa ggcaagtgaa gaacggcttc
1321 tggaagaggg ggtgttgcgg cagatccctg tagtgggctc cgtgctgaat tggttttctc
1381 cggtccaggc tttacagaag ggaagaactt ttaacttgac agcaggctct ctggagtcca
1441 cagaacccat atatgtctac aaagcacaag gtgcaggagt cacgctgcct ccaacgccct
1501 cgggcagtcg caccaagcag aggcttccag gccagaagcc ttttaaaagg tccctgcgag
1561 gttcagatgc tttgagtgag accagctcag tcagtcacat tgaagactta gaaaaggtgg
1621 agcgcctatc cagtgggccg gagcagatca ccctcgaggc cagcagcact gagggacacc
1681 caggggctcc cagccctcag cacaccgacc agaccgaggc cttccagaaa ggggtcccac
1741 acccagaaga tgaccactca caggtagaag gaccggagag cttaagatga gactcattgt
1801 gtggtttgag actgtactga gtattgtttc agggaagatg aagttctatt ggaaatgtga
1861 actgtgccac atactaatat aaattactgt tgtttgtgct tcactgggat tttggcacaa
1921 atatgtgcct gaaaggtagg ctttctagga ggggagtcag cttgtctaac ttcatgtaca
1981 tgtagaacca catgtttgct gtcctactac gacttttccc taagttacca taaacacatt
2041 ttattcacaa aaaacacttc gaatttcaag tgtctaccag tagcaccctt gctctttcta
2101 aacataagcc taagtatatg aggttgcccg tggcaacttt ttggtaaaac agcttttcat
2161 tagcactctc caggttctct gcaacacttc acagaggcga gactggctgt atcctttgct
2221 gtcggtcttt agtacgatca agttgcaata tacagtggga ctgctagact tgaaggagag
2281 cagtgattgt gggattgtaa ataagagcat cagaagccct ccccagctac tgctcttcgt
2341 ggagacttag taaggactgt gtctacttga gctgtggcaa ggctgctgtc tgggactgtc
2401 ctctgccaca aggccatttc tcccattata taccgtttgt aaagagaaac tgtaaagtct
2461 cctcctgacc atatattttt aaatactggc aaagctttta aaattggcac acaagtacag
2521 actgtgctca tttctgttta gtatctgaaa acctgataga tgctaccctt aagagcttgc
2581 tcttccgtgt gctacgtagc acccacctgg ttaaaatctg aaaacaagta cccctttgac
2641 ctgtctccca ctgaagcttc tactgccctg gcagctcgcc tgggcccaac tcagaaacag
2701 gagccagcag agcactctct cacgctgatc cagccgggca ccctgcttaa gtcagtagaa
2761 gctcgctggc actgcccgtt cctacttttc cgaagtactg cgtcactttg tcgtaagtaa
2821 tggcccctgt gccttcttaa tccagcagtc aagcttttgg gagacctgaa aatgggaaaa
2881 ttcacactgg gtttctggac tgtagtattg gaagccttag ttatagtata ttaagcctat
2941 aattatactc tgatttgatg ggatttttga catttacact tgtcaaaatg cagggggttt
3001 tttttggtgc agatgattaa acagtcttcc ctatttggtg caatgaagta tagcagataa
3061 aatgggggag gggtaaatta tcaccttcaa gaaaattaca tgtttttata tatatttgga
3121 attgttaaat tggttttgct gaaacatttc acccttgaga tattatttga atgttggttt
3181 caataaaggt tcttgaaatt gttaccagtg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3241 aaaaa
//