LOCUS BC025357 2102 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), mRNA
(cDNA clone IMAGE:4907098), partial cds.
ACCESSION BC025357
VERSION BC025357.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2102)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2102)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: l Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..2102
/db_xref="H-InvDB:HIT000091060"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4907098"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2102
/gene="B3GNT6"
/gene_synonym="B3Gn-T6"
/gene_synonym="IMAGE:4907098"
/db_xref="GeneID:192134"
/db_xref="HGNC:HGNC:24141"
CDS <1..834
/gene="B3GNT6"
/gene_synonym="B3Gn-T6"
/gene_synonym="IMAGE:4907098"
/codon_start=1
/product="B3GNT6 protein"
/protein_id="AAH25357.1"
/db_xref="GeneID:192134"
/db_xref="HGNC:HGNC:24141"
/translation="PAKCAGGRGVFLLLAVKSAPEHYERRELIRRTWGQERSYGGRPV
RRLFLLGTPGPEDEARAERLAELVALEAREHGDVLQWAFTDTFLNLTLKHLHLLDWLA
ARCPHARFLLSGDDDVFVHTANVVRFLQAQPPGRHLFSGQLMEGSVPIRDSWSKYFVP
PQLFPGSAYPVYCSGGGFLLSGPTARALRAAARHTPLFPIDDAYMGMCLERAGLAPSG
HEGIRPFGVQLPGAQQSSFDPCMYRELLLVHRFAPYEMLLMWKALHSPALSCDRGHRV
S"
BASE COUNT 390 a 668 c 656 g 388 t
ORIGIN
1 ccggccaagt gcgccggcgg ccgaggcgtg ttcctgctcc tggcggtgaa gtcggcgcct
61 gagcactacg agcgacgcga gctcatccgg cgcacgtggg ggcaagagcg cagctacggc
121 gggcggccag tgcgccgcct ctttctattg ggcaccccgg gccccgagga cgaggcgcgc
181 gcggagcggc tggcggagct ggtggcgctg gaggcgcgcg agcacggcga cgtgctgcag
241 tgggccttca cggacacctt cctcaacctc acgctcaagc acctgcactt gctcgactgg
301 ctggctgcac gctgcccgca cgcgcgcttt ctgctcagcg gcgacgacga cgtgttcgtg
361 cacaccgcca acgtagtccg cttcctgcag gcgcagccac ccggccgcca cctgttctcc
421 ggccagctca tggagggctc cgtgcccatc cgcgacagct ggagcaagta cttcgtgccg
481 ccgcagctct tccccgggtc cgcttacccg gtgtactgca gcggcggcgg cttcctcctg
541 tccggcccca cggcccgggc cctgcgcgcg gccgcccgcc acaccccgct cttccccatc
601 gacgacgcct acatgggcat gtgtctggag cgcgccggcc tggcgcccag cggccacgag
661 ggcatccggc ccttcggcgt gcagctgcct ggcgcacagc agtcctcctt cgacccctgc
721 atgtaccgcg agttgctgct agtgcaccgc ttcgcgccct acgagatgct gctcatgtgg
781 aaggcgctgc acagccccgc gctcagctgt gaccggggac accgggtctc ctgaggccag
841 ttgggcggct tcagccccgg gcctccaacc atgtccatgc tgagaaggca gctttcccgc
901 tctgggtacc ttacgtcctg cccagctctg tgcacctgaa ccccagctgc gcactgaaat
961 cagctggggt ggggggtgtg gaaaatgcct acatcctggc tccatctccc gaagtttcga
1021 tttgattagt ctggggtgga cccagacatg ttaagtattt tttaagttcc tccagtgatg
1081 cgaatgtgca gctaggcctg aggaccactc ggctagacta tctcttcatc ctcgcaaagc
1141 cagctccacc gccctctctg caagaattcc gggcccctcg ctcccacact cgggtcctct
1201 tgagcagtgg agcaagggag acctgggagc gtgggagcca ggatcagcgc cccctgccat
1261 gtgcctacaa atgtcagttg tgatttccac tgtttacaag tgagtggagc tggagctggg
1321 ctgacagtgt caggtggatc ccgcttcccc ctcccccaag aagtcagcca acacgcagct
1381 gaggcgcatg tggtggcctt cttcccacca ctaccccagt acagcgtgag gtagaaatct
1441 tcaccgtgca aagtggaaac cagaggcccg gtcagacagt gactaatcca gggccgtggc
1501 attcccagac agcacaccac tgtggtcccc tccacactca ccccaaccaa agctaatggc
1561 ctagttgggt cctgcccgcc aataatcacc cccacgggtc agagacaggc tccttgccgg
1621 ggtctgggcc tcaggctcag tgggccttgg acaacccagc agggagttcc ggggagtccg
1681 aagtggagaa aggctggtgg gaacatggag gccagtgttg gggagcctgt ggaggcaggt
1741 gtgtagaatt gtgttcggga ggtgggggat ctgagaccga agtggacagt ggttaagatt
1801 gtggggccgg gcgaggtggc tcacgcctgt aatcccagca ctttgggagg ctgaggaggt
1861 cggatcatga ggtcaagagt tcgagaccag cctggccaat atggtgaaac cccgtctcta
1921 ttgggagtac aaaaattagc cggccatagt ggctcgtgcc tgtaatctca gctatttggg
1981 aggctgaggc aggagaatca cttgaacctg ggaggcggag gttgcagtga gccgagatcg
2041 tgccactgca ctccagcctg ggcgacagag caagactgca tctcaaaaaa aaaaaaaaaa
2101 aa
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