LOCUS BC025354 1071 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens CKLF-like MARVEL transmembrane domain containing 2,
mRNA (cDNA clone MGC:39436 IMAGE:4904062), complete cds.
ACCESSION BC025354
VERSION BC025354.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1071)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1071)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31563435.
FEATURES Location/Qualifiers
source 1..1071
/db_xref="H-InvDB:HIT000039905"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39436 IMAGE:4904062"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1071
/gene="CMTM2"
/gene_synonym="MGC39436"
/db_xref="GeneID:146225"
/db_xref="HGNC:HGNC:19173"
/db_xref="MIM:607885"
CDS 152..898
/gene="CMTM2"
/gene_synonym="MGC39436"
/codon_start=1
/product="CKLF-like MARVEL transmembrane domain containing
2"
/protein_id="AAH25354.1"
/db_xref="GeneID:146225"
/db_xref="HGNC:HGNC:19173"
/db_xref="MIM:607885"
/translation="MAPKAAKGAKPEPAPAPPPPGAKPEEDKKDGKEPSDKPQKAVQD
HKEPSDKPQKAVQPKHEVGTRRGCRRYRWELKDSNKEFWLLGHAEIKIRSLGCLIAAM
ILLSSLTVHPILRLIITMEISFFSFFILLYSFAIHRYIPFILWPISDLFNDLIACAFL
VGAVVFAVRSRRSMNLHYLLAVILIGAAGVFAFIDVCLQRNHFRGKKAKKHMLVPPPG
KEKGPQQGKGPEPAKPPEPGKPPGPAKGKK"
BASE COUNT 290 a 272 c 274 g 235 t
ORIGIN
1 gttggcattc ggtggtcctg gcagttagct gagcacgccc tctgagccgc tcggtggaca
61 ccaggcactc tagtaggcct ggcctaccca gaaacagcag gagagagaag aaacaggcca
121 gctgtgagaa gccaaggaca ccgagtcagt catggcacct aaggcggcaa agggggccaa
181 gccagagcca gcaccagctc cacctccacc cggggccaaa cccgaggaag acaagaagga
241 cggtaaggag ccatcggaca aacctcaaaa ggcggtgcag gaccataagg agccatcgga
301 caaacctcaa aaggcggtgc agcccaagca cgaagtgggc acgaggaggg ggtgtcgccg
361 ctaccggtgg gaattaaaag acagcaataa agagttctgg ctcttggggc acgctgagat
421 caagattcgg agtttgggct gcctaatagc tgcaatgata ctgttgtcct cactcaccgt
481 gcaccccatc ttgaggctta tcatcaccat ggagatatcc ttcttcagct tcttcatctt
541 actgtacagc tttgccattc atagatacat acccttcatc ctgtggccca tttctgacct
601 cttcaacgac ctgattgctt gtgcgttcct tgtgggagcc gtggtctttg ctgtgagaag
661 tcggcgatcc atgaatctcc actacttact tgctgtgatc cttattggtg cggctggagt
721 ttttgctttt atcgatgtgt gtcttcaaag aaaccacttc agaggcaaga aggccaaaaa
781 gcatatgctg gttcctcctc caggaaagga aaaaggaccc cagcagggca agggaccaga
841 acccgccaag ccaccagaac ctggcaagcc accagggcca gcaaagggaa agaaatgact
901 tggaggaggc tcctggtgtc tgaaacggca gtgtatttta cagcaatatg tttccactct
961 cttccttgtc ttctttctgg aatggttttc ttttccattt tcattaccac ctttgcttgg
1021 aaaagaatgg attaatggat tctaaaagcc taaaaaaaaa aaaaaaaaaa a
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