LOCUS BC025340 1272 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens hypothetical protein MGC39372, mRNA (cDNA clone
IMAGE:5089466), complete cds.
ACCESSION BC025340
VERSION BC025340.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1272)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1272)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene prediction
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1272
/db_xref="H-InvDB:HIT000039903"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5089466"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1272
/gene="MGC39372"
/db_xref="GeneID:221756"
CDS 273..371
/gene="MGC39372"
/codon_start=1
/product="MGC39372 protein"
/protein_id="AAH25340.1"
/db_xref="GeneID:221756"
/translation="MDSKDVEVSSIQVRRKPQHGVCSQLLGNYRCL"
BASE COUNT 349 a 314 c 314 g 295 t
ORIGIN
1 gagagttctg gcgagggctg cgggaaggaa agggggcggc gtccttcaca gggagggtgc
61 agctgacctc tctccccttg tgcagactgg aaaagaatgg cccagatcct ctggactcct
121 cagatgagcg gattcagaga gaagcttttg agagcgtgct ggcagagaca tttttcacag
181 aagagccctt gcggtgctgg tgtccgtggc gtgcctgggt ggaaaatgag cttatatatg
241 aagaagtcag cgagtggaca aagccaggcg caatggatag caaagatgtg gaagtctcct
301 cgattcaagt tagaagaaaa ccgcagcatg gagtctgctc tcagctgttg gggaattacc
361 gatgcctttg actaagtcaa gactgacttt tccagaatat cacccaagag atagagccgt
421 ccctgtccaa gtttgtgcgc tagcccttca tggaggtcag agaggaagaa acaaaggcag
481 ctgtggcctc ggcggtcaca gtgtcagaac gcacaagccc cataaagagg tttcacgcag
541 gccacccatc ccttttcatt ctccagcaga acaggacaga gagcgttctg ttctgcggaa
601 ggtcttccac tctacaaggc aatccctcca gctgctttgc tgtattgtgc tgtctcctgt
661 cacactatga atgcagtgac ctcagccagc aacagggaga acccccctgc ctcccgaaca
721 aaggacctca cgtgaaatcc tgagctcaga gcttacagat atgtgtgcgc tttcacttta
781 catcggccgt gacttccaaa caacttcagg aaactttagg atctctgagg tatactggag
841 atgacagcag cgtagaatgt tcatttggat ttagaacaga aatgcttatt ttatatttgg
901 ctgctcccaa actgtcccca gacttcctct ccagtggtta ccctccactg ccctggatgt
961 cccacgttta cactccacac tcacacctcc accttaacaa agtcctccac tgggtcaaac
1021 catacatcgc ttcgtctctg tagtgatgac ttcctgtcct ctgctctgtg gataaagacc
1081 ccagataaag atgcctgtgt tgctcaactc ttgtaaatac tcttgagaca ttttgaaagc
1141 agaaggaaag gagacagacg gggaaaataa aagggatggt ctgcttgtgc ggaaacgttt
1201 tgagaatgcc cttccctaag agagaacagt aaaagtgagc aatacttcct gaaaaaaaaa
1261 aaaaaaaaaa aa
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