LOCUS BC025312 2610 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens solute carrier family 17, member 9, mRNA (cDNA clone
MGC:39296 IMAGE:4563089), complete cds.
ACCESSION BC025312
VERSION BC025312.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2610)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2610)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31542262
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2610
/db_xref="H-InvDB:HIT000039893"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39296 IMAGE:4563089"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2610
/gene="SLC17A9"
/db_xref="GeneID:63910"
/db_xref="HGNC:HGNC:16192"
/db_xref="MIM:612107"
CDS 205..1371
/gene="SLC17A9"
/codon_start=1
/product="SLC17A9 protein"
/protein_id="AAH25312.1"
/db_xref="GeneID:63910"
/db_xref="HGNC:HGNC:16192"
/db_xref="MIM:612107"
/translation="MTLTSRRQDSQEARPECQAWTGTLLLGTCLLYCARSSMPICTVS
MSQDFGWNKKEAGIVLSSFFWGYCLTQVVGGHLGDRIGGEKVILLSASAWGSITAVTP
LLAHLSSAHLAFMTFSRILMGLLQGVYFPALTSLLSQKVRESERAFTYSIVGAGSQFG
TLLTGAVGSLLLEWYGWQSIFYFSGGLTLLWVWYVYRYLLSEKDLILALGVLAQSRPV
SRHSRVPWRRLFRKPAVWAAVVSQLSAACSFFILLSWLPTFFEETFPDAKGWIFNVVP
WLVAIPASLFSGFLSDHLINQGYRAITVRKLMQGMGLGLSSVFALCLGHTSSFCESVV
FASASIGLQTFNHSGISVNIQDLAPSCAGFLFGVANTAGALAGVVGVCLGGYLM"
BASE COUNT 466 a 847 c 749 g 548 t
ORIGIN
1 ccagacggaa gcgcgctggg actgacacgt ggacttgggc ggtgctgccc gggtgggtca
61 gcctgggctg ggaggcagcc ccgggacaca gctgtgccca cgccgtctga gcaccccaag
121 cccgatgcag ccacccccag acgaggcccg cagggacatg gccggggaca cccagtggtc
181 caggtggaac caccctgtgt atgcatgacc ctgacaagca ggcgccagga cagtcaggag
241 gccaggcccg agtgccaggc atggacgggg acgctgctgc tgggcacgtg ccttctgtac
301 tgcgcccgct ccagcatgcc catctgcacc gtctccatga gccaggactt cggctggaac
361 aagaaggagg ccggcatcgt gctcagcagc ttcttctggg gctactgcct gacacaggtt
421 gtgggcggcc acctcgggga tcggattggg ggtgagaagg tcatcctgct gtcagcctct
481 gcctggggct ccatcacggc cgtcacccca ctgctcgccc acctgagcag tgcccacctg
541 gccttcatga ccttctcacg catcctcatg ggcttgctcc aaggggttta cttccctgcc
601 ctgaccagcc tgctgtcgca gaaggtgcgg gagagtgagc gagccttcac ctacagcatc
661 gtgggcgccg gctcccagtt tgggacgctg ctgaccgggg cggtgggctc cctgctcctg
721 gaatggtacg gctggcagag catcttctat ttctccggcg gcctcacctt gctttgggtg
781 tggtacgtgt acaggtacct gctgagtgaa aaagatctca tcctggcctt gggtgtcctg
841 gcccaaagcc ggccggtgtc caggcacagc agagtcccct ggagacggct cttccggaag
901 cctgctgtct gggcagccgt cgtctcccag ctctctgcag cctgctcctt cttcatcctc
961 ctctcctggc tgcccacctt cttcgaggag accttccccg acgccaaggg ctggatcttc
1021 aacgtggttc cttggttggt ggcgattccg gccagtctat tcagcgggtt tctctctgat
1081 catctcatca atcagggtta cagagccatc acggtgcgga agctcatgca gggcatgggc
1141 cttggcctct ccagcgtctt tgctctgtgc ctgggccaca cctccagctt ctgtgagtct
1201 gtggtctttg catcagcctc catcggcctc cagaccttca accacagtgg catttctgtt
1261 aacatccagg acttggcccc gtcctgcgcc ggctttctgt ttggtgtggc caacacagcc
1321 ggggccttgg caggtgtcgt gggtgtgtgt ctaggcggct acttgatgta gaccacgggc
1381 tcctggactt gcctgttcaa ccttgtggcc atcatcagca acctggggct gtgcaccttc
1441 ctggtgtttg gacaggctca gagggtggac ctgagctcta cccatgagga cctctagctc
1501 ccaaccccac agcctctcca aggacccagg cgccagcagc cccgggacac aggggactca
1561 gtgtgtggga cttggtcact ccatgtcaga cacacgagca gagaggaaca caaaccactg
1621 tggagcctga agctccttaa gaagagtcca caacagctgg tgggagggtg gggtgggcct
1681 gggtccagac caggctcgct gctctctggg cctcagtttc cccacctgcc agcgggctcg
1741 gccctgtcct cctcacaggc tggtgtggcc gtcagggtgg gtggggttat tgttagtagg
1801 cgcagcctca ttcccaccac gatctgttcc gcgtggttcc cgccaaacct ccctcggtcg
1861 ccgtgttctc cgcaagcctc ctgcagcgcc cgcctgccaa tgtgaggctg gcaccaggct
1921 gcagcctccc caatcccagc ccactttgct gtgtctctgg cgggctgtcc tccttggtgg
1981 gagctgtcct gcacactgta ggatgcttaa aggtatccct ggcctccacc cacccctagc
2041 cagcagctcc cagtcagaca acagccagaa atgtctccag actctgccca gcctccccag
2101 gtagccaccc tcgagacacg acctcagagt ctctgtgtct cctagaagcc tgacagagac
2161 ccccagggca gtgggtgggt ggcgggctag agacccttgc ctgtgtccgg gaccctggcg
2221 ccgctctccc ctcctgtgga tccctccgca ctaacagtgt tctcagtggg cagacgcctg
2281 ggcacccctt gggccctgcc cagcatggcc atggcgcagg ctctcgaacc cgcatggctt
2341 tcccaggcct ggtgattctg ctctccaggg acggttggca ccttcctcgg gggcgggccc
2401 cacgcacccc agaacacaca gacccacctt tctggcgttc tttctacctc ccttttcgtt
2461 gcctgaggag ctggtggttt catgagttaa tgatacatct tgcaaggtgt acacatagag
2521 aaaaaaacct aaaaatgtgg aaaagcacgc caaagcctta tttaaataat aactattaaa
2581 ctattcaaaa agaaaaaaaa aaaaaaaaaa
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