LOCUS BC025305 2165 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens CLPTM1-like, mRNA (cDNA clone MGC:39275
IMAGE:3051368), complete cds.
ACCESSION BC025305
VERSION BC025305.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2165)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2165)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: a Column: 5.
FEATURES Location/Qualifiers
source 1..2165
/db_xref="H-InvDB:HIT000039891"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39275 IMAGE:3051368"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2165
/gene="CLPTM1L"
/gene_synonym="CRR9"
/gene_synonym="DKFZP761M2324"
/gene_synonym="FLJ14400"
/db_xref="GeneID:81037"
/db_xref="HGNC:HGNC:24308"
CDS 48..1664
/gene="CLPTM1L"
/gene_synonym="CRR9"
/gene_synonym="DKFZP761M2324"
/gene_synonym="FLJ14400"
/codon_start=1
/product="CLPTM1-like"
/protein_id="AAH25305.1"
/db_xref="GeneID:81037"
/db_xref="HGNC:HGNC:24308"
/translation="MWSGRSSFTSLVVGVFVVYVVHTCWVMYGIVYTRPCSGDANCIQ
PYLARRPKLQLSVYTTTRSHLGAENNIDLVLNVEDFDVESKFERTVNVSVPKKTRNNG
TLYAYIFLHHAGVLPWHDGKQVHLVSPLTTYMVPKPEEINLLTGESDTQQIEAEKKPT
SALDEPVSHWRPRLALNVMADNFVFDGSSLPADVHRYMKMIQLGKTVHYLPILFIDQL
SNRVKDLMVINRSTTELPLTVSYDKVSLGRLRFWIHMQDAVYSLQQFGFSEKDADEVK
GIFVDTNLYFLALTFFVAAFHLLFDFLAFKNDISFWKKKKSMIGMSTKAVLWRCFSTV
VIFLFLLDEQTSLLVLVPAGVGAAIELWKVKKALKMTIFWRGLMPEFQFGTYSESERK
TEEYDTQAMKYLSYLLYPLCVGGAVYSLLNIKYKSWYSWLINSFVNGVYAFGFLFMLP
QLFVNYKLKSVAHLPWKAFTYKAFNTFIDDVFAFIITMPTSHRLACFRDDVVFLVYLY
QRWLYPVDKRRVNEFGESYEEKATRAPHTD"
BASE COUNT 464 a 573 c 600 g 528 t
ORIGIN
1 ggcggctgag aggcgggcgg gccgggggcg ccgggcgcgg ggccgccatg tggagcggcc
61 gcagctcctt caccagcttg gtggtgggcg tgttcgtggt ctacgtggtg cacacctgct
121 gggtcatgta cggcatcgtc tacacccgcc cgtgctccgg cgacgccaac tgcatccagc
181 cctacctggc gcggcggccc aagctgcagc tgagcgtgta caccacgacg aggtcccacc
241 tgggtgctga gaacaacatc gacctggtct tgaatgtgga agactttgat gtggagtcca
301 aatttgaaag gacagttaat gtttctgtac caaagaaaac gagaaacaat gggacgctgt
361 atgcctacat cttcctccat cacgctgggg tcctgccgtg gcacgacggg aagcaggtgc
421 acctggtcag tcctctgacc acctacatgg tccccaagcc agaagaaatc aacctgctca
481 ccggggagtc tgatacacag cagatcgagg cggagaagaa gccgacgagt gccctggatg
541 agccagtgtc ccactggcga ccgcggctgg cgctgaacgt gatggcggac aactttgtct
601 ttgacgggtc ctccctgcct gccgatgtgc atcggtacat gaagatgatc cagctgggga
661 aaaccgtgca ttacctgccc atcctgttca tcgaccagct cagcaaccgc gtgaaggacc
721 tgatggtcat aaaccgctcc accaccgagc tgcccctcac cgtgtcctac gacaaggtct
781 cactggggcg gctgcgcttc tggatccaca tgcaggacgc cgtgtactcc ctgcagcagt
841 tcgggttttc agagaaagat gctgatgagg tgaaaggaat ttttgtagat accaacttat
901 acttcctggc gctgaccttc tttgtcgcag cgttccatct tctctttgat ttcctggcct
961 ttaaaaatga catcagtttc tggaagaaga agaagagcat gatcggcatg tccaccaagg
1021 cagtgctctg gcgctgcttc agcaccgtgg tcatctttct gttcctgctg gacgagcaga
1081 cgagcctgct ggtgctggtc ccggcgggtg ttggagccgc cattgagctg tggaaagtga
1141 agaaggcatt gaagatgact attttttgga gaggcctgat gcccgaattt cagtttggca
1201 cttacagcga atctgagagg aaaaccgagg agtacgatac tcaggccatg aagtacttgt
1261 catacctgct gtaccctctc tgtgtcgggg gtgctgtcta ttcactcctg aatatcaaat
1321 ataagagctg gtactcctgg ttaatcaaca gcttcgtcaa cggggtctat gcctttggtt
1381 tcctcttcat gctgccccag ctctttgtga actacaagtt gaagtcagtg gcacatctgc
1441 cctggaaggc cttcacctac aaggctttca acaccttcat tgatgacgtc tttgccttca
1501 tcatcaccat gcccacgtct caccggctgg cctgcttccg ggacgacgtg gtgtttctgg
1561 tctacctgta ccagcggtgg ctttatcctg tggataaacg cagagtgaac gagtttgggg
1621 agtcctacga ggagaaggcc acgcgggcgc cccacacgga ctgaaggccg cccgggctgc
1681 cgccagccaa gtgcaacttg aattgtcaat gagtattttt ggaagcattt ggaggaattc
1741 ctagacattg cgttttctgt gttgccaaaa tcccttcgga catttctcag acatctccca
1801 agttcccatc acgtcagatt tggagctggt agcgcttacg atgcccccac gtgtgaacat
1861 ctgtcttggt cacagagctg ggtgctgccg gtcaccttga gctgtggtgg ctcccggcac
1921 acgagtgtcc ggggttcggc catgtcctca cgcgggcagg ggtgggagcc ctcacaggca
1981 agggggctgt tggatttcca tttcaggtgg ttttctaagt gctccttatg tgaatttcaa
2041 acacgtatgg aattcattcc gcatggactc tgggatcaaa ggctctttcc tcttttgttt
2101 gagagttggt tgttttaaag cttaatgtat gtttctattt taaaataaaa aaaaaaaaaa
2161 aaaaa
//