LOCUS BC025296 2039 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens ornithine decarboxylase 1, mRNA (cDNA clone MGC:39254 IMAGE:5088190), complete cds. ACCESSION BC025296 VERSION BC025296.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2039) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2039) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: m Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4505488. FEATURES Location/Qualifiers source 1..2039 /db_xref="H-InvDB:HIT000039888" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39254 IMAGE:5088190" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_99" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..2039 /gene="ODC1" /db_xref="GeneID:4953" /db_xref="HGNC:HGNC:8109" /db_xref="MIM:165640" CDS 302..1687 /gene="ODC1" /codon_start=1 /product="ornithine decarboxylase 1" /protein_id="AAH25296.1" /db_xref="GeneID:4953" /db_xref="HGNC:HGNC:8109" /db_xref="MIM:165640" /translation="MNNFGNEEFDCHFLDEGFTAKDILDQKINEVSSSDDKDAFYVAD LGDILKKHLRWLKALPRVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQSLG VPPERIIYANPCKQVSQIKYAANNGVQMMTFDSEVELMKVARAHPKAKLVLRIATDDS KAVCRLSVKFGATLRTSRLLLERAKELNIDVVGVSFHVGSGCTDPETFVQAISDARCV FDMGAEVGFSMYLLDIGGGFPGSEDVKLKFEEITGVINPALDKYFPSDSGVRIIAEPG RYYVASAFTLAVNIIAKKIVLKEQTGSDDEDESSEQTFMYYVNDGVYGSFNCILYDHA HVKPLLQKRPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVA AASTFNGFQRPTIYYVMSGPAWQLMQQFQNPDFPPEVEEQDASTLPVSCAWESGMKRH RAACASASINV" BASE COUNT 519 a 442 c 531 g 547 t ORIGIN 1 ccgccgcccc tctgccagca gctccggcgc cacctcgggc cggcgtctcc ggcgggcggg 61 agccaggcgc tgacgggcgc ggcgggggcg gccgagcgct cctgcggctg cgactcaggc 121 tccggcgtct gcgcttcccc atggggctgg cctgcggcgc ctgggcgctc tgagattgtc 181 actgctgttc caagggcaca cgcagaggga tttggaattc ctggagagtt gcctttgtga 241 gaagctggaa atatttcttt cgattccatc tcttagtttt ccataggaac atcaagaaat 301 catgaacaac tttggtaatg aagagtttga ctgccacttc ctcgatgaag gttttactgc 361 caaggacatt ctggaccaga aaattaatga agtttcttct tctgatgata aggatgcctt 421 ctatgtggca gacctgggag acattctaaa gaaacatctg aggtggttaa aagctctccc 481 tcgtgtcacc cccttttatg cagtcaaatg taatgatagc aaagccatcg tgaagaccct 541 tgctgctacc gggacaggat ttgactgtgc tagcaagact gaaatacagt tggtgcagag 601 tctgggggtg cctccagaga ggattatcta tgcaaatcct tgtaaacaag tatctcaaat 661 taagtatgct gctaataatg gagtccagat gatgactttt gatagtgaag ttgagttgat 721 gaaagttgcc agagcacatc ccaaagcaaa gttggttttg cggattgcca ctgatgattc 781 caaagcagtc tgtcgtctca gtgtgaaatt cggtgccacg ctcagaacca gcaggctcct 841 tttggaacgg gcgaaagagc taaatatcga tgttgttggt gtcagcttcc atgtaggaag 901 cggctgtacc gatcctgaga ccttcgtgca ggcaatctct gatgcccgct gtgtttttga 961 catgggggct gaggttggtt tcagcatgta tctgcttgat attggcggtg gctttcctgg 1021 atctgaggat gtgaaactta aatttgaaga gatcaccggc gtaatcaacc cagcgttgga 1081 caaatacttt ccgtcagact ctggagtgag aatcatagct gagcccggca gatactatgt 1141 tgcatcagct ttcacgcttg cagttaatat cattgccaag aaaattgtat taaaggaaca 1201 gacgggctct gatgacgaag atgagtcgag tgagcagacc tttatgtatt atgtgaatga 1261 tggcgtctat ggatcattta attgcatact ctatgaccac gcacatgtaa agccccttct 1321 gcaaaagaga cctaaaccag atgagaagta ttattcatcc agcatatggg gaccaacatg 1381 tgatggcctc gatcggattg ttgagcgctg tgacctgcct gaaatgcatg tgggtgattg 1441 gatgctcttt gaaaacatgg gcgcttacac tgttgctgct gcctctacgt tcaatggctt 1501 ccagaggccg acgatctact atgtgatgtc agggcctgcg tggcaactca tgcagcaatt 1561 ccagaacccc gacttcccac ccgaagtaga ggaacaggat gccagcaccc tgcctgtgtc 1621 ttgtgcctgg gagagtggga tgaaacgcca cagagcagcc tgtgcttcgg ctagtattaa 1681 tgtgtagata gcactctggt agctgttaac tgcaagttta gcttgaatta agggatttgg 1741 ggggaccatg taacttaatt actgctagtt ttgaaatgtc tttgtaagag tagggtcgcc 1801 atgatgcagc catatggaag actaggatat gggtcacact tatctgtgtt cctatggaaa 1861 ctatttgaat atttgtttta tatggatttt tattcactct tcagacacgc tactcaagag 1921 tgcccctcag ctgctgaaca agcatttgta gcttgtacaa tggcagaatg ggccaaaagc 1981 ttagtgttgt gacctgtttt taaaataaag tatcttgaaa taaaaaaaaa aaaaaaaaa //