LOCUS BC025276 1877 bp mRNA linear HUM 02-DEC-2006 DEFINITION Homo sapiens UTP18, small subunit (SSU) processome component, homolog (yeast), mRNA (cDNA clone MGC:39182 IMAGE:4861495), complete cds. ACCESSION BC025276 VERSION BC025276.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1877) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1877) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: h Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7705764. FEATURES Location/Qualifiers source 1..1877 /db_xref="H-InvDB:HIT000039877" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39182 IMAGE:4861495" /tissue_type="Skin, melanotic melanoma, high MDR." /clone_lib="NIH_MGC_49" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1877 /gene="UTP18" /gene_synonym="CGI-48" /db_xref="GeneID:51096" /db_xref="HGNC:HGNC:24274" CDS 26..1696 /gene="UTP18" /gene_synonym="CGI-48" /codon_start=1 /product="UTP18, small subunit (SSU) processome component, homolog (yeast)" /protein_id="AAH25276.2" /db_xref="GeneID:51096" /db_xref="HGNC:HGNC:24274" /translation="MPPERRRRMKLDRRTGAKPKRKPGMRPDWKAGAGPGGPPQKPAP SSQRKPPARPSAAAAAIAVAAAEEERRLRQRNRLRLEEDKPAVERCLEELVFGDVEND EDALLRRLRGPRVQEHEDSGDSEVENEAKGNFPPQKKPVWVDEEDEDEEMVDMMNNRF RKDMMKNASESKLSKDNLKKRLKEEFQHAMGGVPAWAETTKRKTSSDDESEEDEDDLL QRTGNFISTSTSLPRGILKMKNCQHANAERPTVARISSVQFHPGAQIVMVAGLDNAVS LFQVDGKTNPKIQSIYLERFPIFKACFSANGEEVLATSTHSKVLYVYDMLAGKLIPVH QVRGLKEKIVRSFEVSPDGSFLLINGIAGYLHLLAMKTKELIGSMKINGRVAASTFSS DSKKVYASSGDGEVYVWDVNSRKCLNRFVDEGSLYGLSIATSRNGQYVACGSNCGVVN IYNQDSCLQETNPKPIKAIMNLVTGVTSLTFNPTTEILAIASEKMKEAVRLVHLPSCT VFSNFPVIKNKNISHVHTMDFSPRSGYFALGNEKGKALMYRLHHYSDF" BASE COUNT 570 a 359 c 488 g 460 t ORIGIN 1 cctgcgtttc tcctcaaacc taacgatgcc gccggagcgg aggagacgaa tgaaactgga 61 ccggagaacc ggagcgaagc cgaagcggaa gcccggaatg aggccggact ggaaagccgg 121 agcggggcca ggcgggcctc cccaaaagcc tgccccttca tcccagcgga aaccgccggc 181 ccggccgagc gcggcggccg ctgcgattgc agtcgcggcg gcggaggaag agagacggct 241 ccggcagcgg aaccgcctga ggctggagga ggacaaaccg gccgtggagc ggtgcttgga 301 ggagctggtc ttcggcgacg tcgagaacga cgaggacgcg ttgctgcggc gtctgcgagg 361 cccgagggtt caagaacatg aagactcggg tgactcagaa gtggagaatg aagcaaaagg 421 taattttcca cctcaaaaga agccagtttg ggtggatgaa gaagatgaag atgaggaaat 481 ggttgacatg atgaacaatc ggtttcggaa ggatatgatg aaaaatgcta gtgaaagtaa 541 actttcgaaa gacaacctta aaaagagact taaagaagaa ttccaacatg ccatgggagg 601 agtacctgcc tgggcagaga ctactaagcg gaaaacatct tcagatgatg aaagtgaaga 661 ggatgaagat gatttgttgc aaaggactgg gaatttcata tccacatcaa cttctcttcc 721 aagaggcatc ttgaagatga agaactgcca gcatgcgaat gctgaacgtc ctactgttgc 781 tcggatctca tctgtgcagt tccatcccgg tgcacagatt gtgatggttg ctggattaga 841 taatgctgta tcactatttc aggttgatgg gaaaacaaat cctaaaattc agagcatcta 901 tttggaaagg tttccaatct ttaaggcttg ttttagtgct aatggggaag aagttttagc 961 cacgagtacc cacagcaagg ttctttatgt ctatgacatg ctggctggaa agttaattcc 1021 tgtgcatcaa gtgagaggtt tgaaagagaa gatagtgagg agctttgaag tctccccaga 1081 tgggtccttc ttgctcataa atggcattgc tggatatttg catttgctag caatgaagac 1141 caaagaactg attggaagca tgaaaattaa tggaagggtt gcagcatcca cattctcttc 1201 agatagtaag aaagtatacg cctcttcggg ggatggagaa gtttatgttt gggatgtgaa 1261 ctcaaggaag tgccttaaca gatttgttga tgaaggcagt ttatatggat taagcattgc 1321 cacatctagg aatggacagt atgttgcttg tggttctaat tgtggagtgg taaatatata 1381 caatcaagat tcttgtctcc aagaaacaaa cccaaagcca ataaaagcta taatgaactt 1441 ggttacaggt gttacttctc tgaccttcaa tcctactaca gaaatcttgg caattgcttc 1501 agaaaaaatg aaagaagcag tcagattggt tcatcttcct tcctgtacag tattttcaaa 1561 cttcccagtc attaaaaata agaatatttc tcatgttcat accatggatt tttctccgag 1621 aagtggatac tttgccttgg ggaatgaaaa gggcaaggcc ctgatgtata ggttgcacca 1681 ttactcagac ttctaaagag actatttgaa gtccagttga gtcacaagag aagcctgtct 1741 tgatatatca tctcagaaac tttcctgaat atgtgataat atatggaaaa tgatttatag 1801 atccagctgt gcttaagagc cagtaatgtc ttaataaaca tgtggcagct tttgtttgaa 1861 aaaaaaaaaa aaaaaaa //