LOCUS BC025264 1763 bp mRNA linear HUM 02-DEC-2004 DEFINITION Homo sapiens YTH domain family, member 1, mRNA (cDNA clone IMAGE:5087992), partial cds. ACCESSION BC025264 VERSION BC025264.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1763) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1763) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lou Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: m Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31377749. FEATURES Location/Qualifiers source 1..1763 /db_xref="H-InvDB:HIT000091010" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5087992" /tissue_type="Lymph, lymphoma" /clone_lib="NIH_MGC_99" /lab_host="DH10B" /note="Vector: pOTB7" gene <1..1763 /gene="YTHDF1" /gene_synonym="C20orf21" /gene_synonym="FLJ20391" /db_xref="GeneID:54915" CDS <1..1511 /gene="YTHDF1" /gene_synonym="C20orf21" /gene_synonym="FLJ20391" /codon_start=3 /product="YTHDF1 protein" /protein_id="AAH25264.1" /db_xref="GeneID:54915" /translation="SYYPPSIGFPYSLNEAPWSTAGDPPIPYLTTYGQLSNGDHHFMH DAVFGQPGGLGNNIYQHRFNFFPENPAFSAWGTSGSQGQQTQSSAYGSSYTYPPSSLG GTVVDGQPGFHSDTLSKAPGMNSLEQGMVGLKIGDVSSSAVKTVGSVVSSVALTGVLS GNGGTNVNMPVSKPTSWAAIASKPAKPQPKMKTKSGPVMGGGLPPPPIKHNMDIGTWD NKGPVPKAPVPQQAPSPQAAPQPQQVAQPLPAQPPALAQPQYQSPQQPPQTRWVAPRN RNAAFGQSGGAGSDSNSPGNVQPNSAPSVESHPVLEKLKAAHSYNPKEFEWNLKSGRV FIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV AEMKSPVDYGTSAGVWSQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNSRD TQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQEEEEVVRKERQSRNKQ" BASE COUNT 432 a 495 c 466 g 370 t ORIGIN 1 ccagctatta cccgccgtcc attggatttc cttactccct caatgaggct ccgtggtcta 61 ctgcagggga ccctccgatt ccatacctca ccacctacgg acagctcagt aacggagacc 121 atcattttat gcacgatgct gtttttgggc agcctggggg cctggggaac aacatctatc 181 agcacaggtt caattttttc cctgaaaacc ctgcgttctc agcatggggg acaagtgggt 241 ctcaaggtca gcagacccag agctccgcgt atgggagcag ctacacctac cccccgagct 301 ccctgggtgg cacggtggtt gatgggcagc caggctttca cagcgacacc ctcagcaagg 361 cccccgggat gaacagcctg gagcagggca tggttggcct gaagattggg gacgtcagct 421 cctccgctgt caagacggtg ggctctgtcg tcagcagcgt ggcactgact ggtgtccttt 481 ctggcaacgg tgggacaaat gtgaacatgc cagtttcaaa gccgacctcg tgggctgcca 541 ttgccagcaa gcctgcaaaa ccacagccta aaatgaaaac aaagagcggg cctgtcatgg 601 ggggtgggct gccccctcca cccataaagc ataacatgga cattggcacc tgggataaca 661 aggggcctgt gccgaaggcc ccagtccccc agcaggcacc ctctccacag gctgccccac 721 agccccagca ggtggctcag cctctcccag cacagccccc agctttggct caaccgcagt 781 atcagagccc tcagcagcca ccccagaccc gctgggttgc cccacgcaac agaaacgcgg 841 cgtttgggca gagcggaggg gctggcagcg atagcaactc tcctggaaac gtccagccta 901 attctgcccc cagcgtcgaa tcccaccccg tccttgaaaa actgaaggct gctcacagct 961 acaacccgaa agagtttgag tggaatctga aaagcgggcg tgtgttcatc atcaagagct 1021 actctgagga cgacatccac cgctccatta agtactccat ctggtgtagc acagagcacg 1081 gcaacaagcg cctggacagc gccttccgct gcatgagcag caaggggccc gtctacctgc 1141 tcttcagcgt caatgggagt gggcattttt gtggggtggc cgagatgaag tcccccgtgg 1201 actacggcac cagtgccggg gtctggtctc aggacaagtg gaaggggaag tttgatgtcc 1261 agtggatttt tgttaaggat gtacccaata accagctccg gcacatcagg ctggagaata 1321 acgacaacaa accggtcaca aactcccggg acacccagga ggtgccctta gaaaaagcca 1381 agcaagtgct gaaaattatc agttcctaca agcacacaac ctccatcttc gacgactttg 1441 ctcactacga gaagcgccag gaggaggagg aggtggtgcg caaggaacgg cagagtcgaa 1501 acaaacaatg agggcgaacc agtttcttac atgttctaac gtttgacttt gaaaacagtt 1561 taaaacacgt gtgcttggtc agctccagtg tgtcgtcccg tgcgggggtt gagtgttgca 1621 tctttgcctt tcttgtcgtt gatttttgcc cagatggatc tgcatttatt tgtacttttt 1681 ctatgtatta taatcctgta gaagtcacta ataaaggagt attttttttg tcagcttatc 1741 aatcaaaaaa aaaaaaaaaa aaa //