LOCUS BC025256 2820 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens stimulated by retinoic acid gene 6 homolog (mouse), mRNA (cDNA clone MGC:39134 IMAGE:4892821), complete cds. ACCESSION BC025256 VERSION BC025256.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2820) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2820) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: i Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21314699. FEATURES Location/Qualifiers source 1..2820 /db_xref="H-InvDB:HIT000039865" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39134 IMAGE:4892821" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2820 /gene="STRA6" /gene_synonym="FLJ12541" /gene_synonym="PP14296" /db_xref="GeneID:64220" /db_xref="HGNC:HGNC:30650" CDS 155..2158 /gene="STRA6" /gene_synonym="FLJ12541" /gene_synonym="PP14296" /codon_start=1 /product="stimulated by retinoic acid gene 6 homolog (mouse)" /protein_id="AAH25256.1" /db_xref="GeneID:64220" /db_xref="HGNC:HGNC:30650" /translation="MSSQPAGNQTSPGATEDYSYGSWYIDEPQGGEELQPEGEVPSCH TSIPPGLYHACLASLSILVLLLLAMLVRRRQLWPDCVRGRPGLPSPVDFLAGDRPRAV PAAVFMVLLSSLCLLLPDEDALPFLTLASAPSQDGKTEAPRGAWKILGLFYYAALYYP LAACATAGHTAAHLLGSTLSWAHLGVQVWQRAECPQVPKIYKYYSLLASLPLLLGLGF LSLWYPVQLVRSFSRRTGAGSKGLQSSYSEEYLRNLLCRKKLGSSYHTSKHGFLSWAR VCLRHCIYTPQPGFHLPLKLVLSATLTGTAIYQVALLLLVGVVPTIQKVRAGVTTDVS YLLASFGIVLSEDKQEVVELVKHHLWALEVCYISALVLSCLLTFLVLMRSLVTHRTNL RALHRGAALDLSPLHRSPHPSRQAIFCWMSFSAYQTAFICLGLLVQQIIFFLGTTALA FLVLMPVLHGRNLLLFRSLESSWPFWLTLALAVILQNMAAHWVFLETHDGHPQLTNRR VLYAATFLLFPLNVLVGAMVATWRVLLSALYNAIHLGQMDLSLLPPRAATLDPGYYTY RNFLKIEVSQSHPAMTAFCSLLLQAQSLLPRTMAAPQDSLRPGEEDEGMQLLQTKDSM AKGARPGASRGRARWGLAYTLLHNPTLQVFRKTALLGANGAQP" BASE COUNT 544 a 919 c 784 g 573 t ORIGIN 1 ccagaaaggg gcaggctgag gctgggggag gggctcaagg gagcccagct gggagggccc 61 aggcaggcag tgcggagctg gccgtgggct gcctaccctt tcatctctgc aactccttcc 121 tccctgggcc tcccttctgg agaagggcca gagaatgtcg tcccagccag cagggaacca 181 gacctccccc ggggccacag aggactactc ctatggcagc tggtacatcg atgagcccca 241 ggggggcgag gagctccagc cagaggggga agtgccctcc tgccacacca gcataccacc 301 cggcctgtac cacgcctgcc tggcctcgct gtcaatcctt gtgctgctgc tcctggccat 361 gctggtgagg cgccgccagc tctggcctga ctgtgtgcgt ggcaggcccg gcctgcccag 421 ccctgtggat ttcttggctg gggacaggcc ccgggcagtg cctgctgctg ttttcatggt 481 cctcctgagc tccctgtgtt tgctgctccc cgacgaggac gcattgccct tcctgactct 541 cgcctcagca cccagccaag atgggaaaac tgaggctcca agaggggcct ggaagatact 601 gggactgttc tattatgctg ccctctacta ccctctggct gcctgtgcca cggctggcca 661 cacagctgca cacctgctcg gcagcacgct gtcctgggcc caccttgggg tccaggtctg 721 gcagagggca gagtgtcccc aggtgcccaa gatctacaag tactactccc tgctggcctc 781 cctgcctctc ctgctgggcc tcggattcct gagcctttgg taccctgtgc agctggtgag 841 aagcttcagc cgtaggacag gagcaggctc caaggggctg cagagcagct actctgagga 901 atatctgagg aacctccttt gcaggaagaa gctgggaagc agctaccaca cctccaagca 961 tggcttcctg tcctgggccc gcgtctgctt gagacactgc atctacactc cacagccagg 1021 attccatctc ccgctgaagc tggtgctttc agctacactg acagggacgg ccatttacca 1081 ggtggccctg ctgctgctgg tgggcgtggt acccactatc cagaaggtga gggcaggggt 1141 caccacggat gtctcctacc tgctggccag ctttggaatc gtgctctccg aggacaagca 1201 ggaggtggtg gagctggtga agcaccatct gtgggctctg gaagtgtgct acatctcagc 1261 cttggtcttg tcctgcttac tcaccttcct ggtcctgatg cgctcactgg tgacacacag 1321 gaccaacctt cgagctctgc accgaggagc tgccctggac ttgagtccct tgcatcggag 1381 tccccatccc tcccgccaag ccatattctg ttggatgagc ttcagtgcct accagacagc 1441 ctttatctgc cttgggctcc tggtgcagca gatcatcttc ttcctgggaa ccacggccct 1501 ggccttcctg gtgctcatgc ctgtgctcca tggcaggaac ctcctgctct tccgttccct 1561 ggagtcctcg tggcccttct ggctgacttt ggccctggct gtgatcctgc agaacatggc 1621 agcccattgg gtcttcctgg agactcatga tggacaccca cagctgacca accggcgagt 1681 gctctatgca gccacctttc ttctcttccc cctcaatgtg ctggtgggtg ccatggtggc 1741 cacctggcga gtgctcctct ctgccctcta caacgccatc caccttggcc agatggacct 1801 cagcctgctg ccaccgagag ccgccactct cgaccccggc tactacacgt accgaaactt 1861 cttgaagatt gaagtcagcc agtcgcatcc agccatgaca gccttctgct ccctgctcct 1921 gcaagcgcag agcctcctac ccaggaccat ggcagccccc caggacagcc tcagaccagg 1981 ggaggaagac gaagggatgc agctgctaca gacaaaggac tccatggcca agggagctag 2041 gcccggggcc agccgcggca gggctcgctg gggtctggcc tacacgctgc tgcacaaccc 2101 aaccctgcag gtcttccgca agacggccct gttgggtgcc aatggtgccc agccctgagg 2161 gcagggaagg tcaacccacc tgcccatctg tgctgaggca tgttcctgcc taccatcctc 2221 ctccctcccc ggctctcctc ccagcatcac accagccatg cagccagcag gtcctccgga 2281 tcactgtggt tgggtggagg tctgtctgca ctgggagcct caggagggct ctgctccacc 2341 cacttggcta tgggagagcc agcaggggtt ctggagaaaa aaactggtgg gttagggcct 2401 tggtccagga gccagttgag ccagggcagc cacatccagg cgtctcccta ccctggctct 2461 gccatcagcc ttgaagggcc tcgatgaagc cttctctgga accactccag cccagctcca 2521 cctcagcctt ggccttcacg ctgtggaagc agccaaggca cttcctcacc ccctcagcgc 2581 cacggacctc tctggggagt ggccggaaag ctcccgggcc tctggcctgc agggcagccc 2641 aagtcatgac tcagaccagg tcccacactg agctgcccac actcgagagc cagatatttt 2701 tgtagttttt atgcctttgg ctattatgaa agaggttagt gtgttccctg caataaactt 2761 gttcctgaga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //