LOCUS       BC025244                1704 bp    mRNA    linear   HUM 25-AUG-2005
DEFINITION  Homo sapiens SHANK-associated RH domain interactor, mRNA (cDNA
            clone MGC:39108 IMAGE:4907493), complete cds.
ACCESSION   BC025244
VERSION     BC025244.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1704)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1704)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAR-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 42 Row: l Column: 16
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 31542518.
FEATURES             Location/Qualifiers
     source          1..1704
                     /db_xref="H-InvDB:HIT000039858"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:39108 IMAGE:4907493"
                     /tissue_type="Pancreas, epithelioid carcinoma"
                     /clone_lib="NIH_MGC_42"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1704
                     /gene="SHARPIN"
                     /gene_synonym="DKFZP434N1923"
                     /gene_synonym="SIPL1"
                     /db_xref="GeneID:81858"
     CDS             485..1465
                     /gene="SHARPIN"
                     /gene_synonym="DKFZP434N1923"
                     /gene_synonym="SIPL1"
                     /codon_start=1
                     /product="SHARPIN protein"
                     /protein_id="AAH25244.1"
                     /db_xref="GeneID:81858"
                     /translation="MAPPAGGAAAAASDLGSAAVLLAVHAAVRPLGAGPDAEAQLRRL
                     QLSADPERPGRFRLELLGAGPGAVNLEWPLESVSYTIRGPTQHELQPPPGGPGTLSLH
                     FLNPQEAQRWAVLVRGATVEGQNGSKSNSPPALGPEACPVSLPSPPEASTLKGPPPEA
                     DLPRSPGNLTEREELAGSLARAIAGGDEKGAAQVAAVLAQHRVALSVQLQEACFPPGP
                     IRLQVTLEDAASAASAASSAHVALQVHPHCTVAALQEQVFSELGFPPAVQRWVIGRCL
                     CVPERSLASYGVRQDGDPAFLYLLSAPREAPAQLVLSFLHLHQCPRPPWL"
BASE COUNT          293 a          582 c          551 g          278 t
ORIGIN      
        1 gtgtgggcgt ggcgggggct ggggtctgcg ggcgaaggtg gtagcccatt ggaggtcccg
       61 ggagcgaagt ccagctgccg ttaggcgctg ggatagtcgc acgctggatg catctacgtc
      121 cgccgagccc ctggggcgaa gaggccgcgt ccgccttcag ttgtggccgg tgcttcgccc
      181 cctgaccctt cgcccccaaa gaccagctct aacgtgagcg cctcggccgc cctgccccag
      241 cctcgtacac gccgccagcc tcgcccagcc ggtgtccgga gaccctcggg ccgtgtccat
      301 ttgtgggcaa agccagcggg gcaggcttgg ccagagtgca ccactcggcg ccgtcccagg
      361 cccgacgctc tgggcgcgcc cggaacccca ggttcgcggc ccgtgtttcc gaccggcgga
      421 gggggctcag cggcccgatc ccacggaagc gcgctcggag gggtgggacc cggccggacc
      481 ggagatggcg ccgccagcgg gcggggcggc ggcggcggcc tcggacttgg gctccgccgc
      541 agtgctcttg gctgtgcacg ccgcggtgag gccgctgggc gccgggccag acgccgaggc
      601 acagctgcgg aggctgcagc tgagcgcgga ccctgagagg cctgggcgct tccggctgga
      661 gctgctgggc gcgggacctg gggcggttaa tttggagtgg cccctggagt cagtttccta
      721 caccatccga ggccccaccc agcacgagct acagcctcca ccaggagggc ctggaaccct
      781 cagcctgcac ttcctcaacc ctcaggaagc tcagcggtgg gcagtcctag tccgaggtgc
      841 caccgtggaa ggacagaatg gcagcaagag caactcacca ccagccttgg gcccagaagc
      901 atgccctgtc tccctgccca gtcccccgga agcctccaca ctcaagggcc ctccacctga
      961 ggcagatctt cctaggagcc ctggaaactt gacggagaga gaagagctgg cagggagcct
     1021 ggcccgggct attgcaggtg gagacgagaa gggggcagcc caagtggcag ccgtcctggc
     1081 ccagcatcgt gtggccctga gtgttcagct tcaggaggcc tgcttcccac ctggccccat
     1141 caggctgcag gtcacacttg aagacgctgc ctctgccgca tccgccgcgt cctctgcaca
     1201 cgttgccctg caggtccacc cccactgcac tgttgcagct ctccaggagc aggtgttctc
     1261 agagctcggt ttcccgccag ccgtgcaacg ctgggtcatc ggacggtgcc tgtgtgtgcc
     1321 tgagcgcagc cttgcctctt acggggttcg gcaggatggg gaccctgctt tcctctactt
     1381 gctgtcagct cctcgagaag ccccagccca gctggtcctg tccttcctgc accttcatca
     1441 atgccccaga ccgccctggc tgtgagatgt gtagcaccca gaggccctgc acttgggacc
     1501 cccttgctgc agcttccacc tagcagccac cagaggttac aaggggagag tggcccttcc
     1561 ctcacaagtc cgacatctcc aggcccccac tgaactccgg ggacctctac tgactgcttg
     1621 ctgggacagt caccagggtt ggggggaagg gccacaaaat gaaaccatta aagaccctta
     1681 agagccaaaa aaaaaaaaaa aaaa
//