LOCUS BC025243 2716 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 8, mRNA (cDNA clone
MGC:39101 IMAGE:4553965), complete cds.
ACCESSION BC025243
VERSION BC025243.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2716)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2716)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14042971.
FEATURES Location/Qualifiers
source 1..2716
/db_xref="H-InvDB:HIT000039857"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39101 IMAGE:4553965"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2716
/gene="CCDC8"
/gene_synonym="DKFZP564K0322"
/db_xref="GeneID:83987"
/db_xref="HGNC:HGNC:25367"
CDS 224..1840
/gene="CCDC8"
/gene_synonym="DKFZP564K0322"
/codon_start=1
/product="coiled-coil domain containing 8"
/protein_id="AAH25243.1"
/db_xref="GeneID:83987"
/db_xref="HGNC:HGNC:25367"
/translation="MLQIGEDVDYLLIPREVRLAGGVWRVISKPATKEAEFRERLTQF
LEEEGRTLEDVARIMEKSTPHPPQPPKKPKEPRVRRRVQQMVTPPPRLVVGTYDSSNA
SDSEFSDFETSRDKSRQGPRRGKKVRKMPVSYLGSKFLGSDLESEDDEELVEAFLRRQ
EKQPSAPPARRRVNLPVPMFEDNLGPQLSKADRWREYVSQVSWGKLKRRVKGWAPRAG
PGVGEARLASTAVESAGVSSAPEGTSPGDRLGNAGDVCVPQASPRRWRPKINWASFRR
RRKEQTAPTGQGADIEADQGGEAADSQREEAIADQREGAAGNQRAGAPADQGAEAADN
QREEAADNQRAGAPAEEGAEAADNQREEAADNQRAEAPADQRSQGTDNHREEAADNQR
AEAPADQGSEVTDNQREEAVHDQRERAPAVQGADNQRAQARAGQRAEAAHNQRAGAPG
IQEAEVSAAQGTTGTAPGARARKQVKTVRFQTPGRFSWFCKRRRAFWHTPRLPTLPKR
VPRAGEARNLRVLRAEARAEAEQGEQEDQL"
BASE COUNT 696 a 703 c 849 g 468 t
ORIGIN
1 cccagatatc accctggaga tcttaaagac tctcgagaaa agccacgtgg ggggctggtt
61 cccctggggc ttcctgccgt cccccgactg cctcattctt tggagcgtcc ccgatgtctg
121 caaagatgtg gatttggacg tcctcgtgga agccctaaag cccgtgggga catttaagaa
181 gatcggcaag gtgttccgca aggaggagga ctccacggtg gggatgctgc agatcgggga
241 ggacgtcgac tatttgctca tcccccggga ggtcaggctg gctgggggcg tctggagagt
301 catctctaag cccgccacca aggaagcaga atttcgggag cggctgaccc agttcctgga
361 agaagagggc cgcaccctgg aggacgtggc ccgcatcatg gagaagagca ccccgcaccc
421 gccccagccc cccaaaaagc ccaaggagcc ccgagtgagg aggagagtgc agcagatggt
481 gactcctccg ccccggctgg tcgtgggcac gtacgacagc agcaacgcca gcgacagcga
541 gttcagcgac ttcgagacct ccagagacaa gagccgccag ggcccgcggc ggggcaagaa
601 ggtgcgcaaa atgcccgtca gctacctggg cagcaagttc ctgggaagcg acctggagag
661 tgaggatgat gaggaactgg tcgaggcctt cctccggcga caggagaagc agcccagcgc
721 gccgcctgcc cgccgccgcg tcaacctgcc agtgcccatg tttgaggaca acctggggcc
781 tcagctgtcc aaagcggaca ggtggcggga gtatgtcagc caggtgtcct gggggaagct
841 gaagcggagg gtgaagggtt gggcgccgag ggcgggcccc ggggtgggcg aggcccggct
901 ggcctccacc gcagtggaga gcgcaggggt atcatcggcg ccagagggca ccagcccggg
961 ggatcgcttg ggaaacgcgg gagatgtttg tgtgccccag gcttccccta ggcgatggag
1021 gcccaagatc aactgggcct cctttcggcg ccgcaggaag gagcagacag cacccacagg
1081 tcagggggca gacatcgagg ctgatcaggg gggagaggct gcagatagtc aaagggaaga
1141 ggccatagct gaccagcggg aaggggctgc aggtaatcag agggcagggg ccccagctga
1201 ccagggggca gaggctgcag ataatcagag ggaagaggct gcagataatc agagggcagg
1261 ggccccagct gaggaggggg cagaggctgc agataaccag agggaagagg ctgcagataa
1321 tcagagggca gaggccccag ctgaccagag gtcacagggc acagataacc acagggaaga
1381 ggctgcagat aatcagaggg cggaggcccc agctgaccag gggtcagagg ttacagataa
1441 tcaaagggaa gaggccgtac atgaccagag ggaaagggcc ccagctgtcc agggtgcaga
1501 taatcagagg gcacaggccc gggctggcca gagggcagag gctgcacata atcagagggc
1561 aggggcccca ggtatccagg aagctgaagt ctcagctgcc caagggacca caggaacagc
1621 tccaggagcc agggcccgga aacaggtcaa gacagtgagg ttccagaccc ctggacgctt
1681 ttcgtggttt tgcaagcgcc ggagagcctt ctggcacact ccccggttgc caaccctgcc
1741 caagagagtc cccagggcag gagaggccag gaacctcagg gtgctgaggg ccgaggccag
1801 agcagaagct gagcagggag agcaagaaga ccagctgtga ggtgagggct agagacagcc
1861 cacgggccct ccctccaagt gtgggaggga gagatgctct gcctctgaac ttcaaagtgg
1921 aggtggagtg ctggccacgt ctccacctaa caaccctctt tattctcttg ttaaagtttt
1981 gttcatgctt tgattttttt ttaaattttt tagagacagg gtctcactct gttgcccagg
2041 ctggagtgca gtggcatgat cataactcac tgcagcctca aacttctggc ctcaagtgat
2101 cctcctgcct cggcctccca aaatgctggg attacagatg tgagccacca cacacaccat
2161 ctgattaaaa aaaaaaatac tgattccttg tagcaaccca aaaaatgtaa agaaagaatt
2221 cgacacaatg gggttgcgtc acctatagtt ttcatttcct caaatgcaac tcaaggtgct
2281 cagcttgata aagggagaga gggagggcag gggagaaact gactcctttt tccatctctt
2341 ttttgcctgc acacttaatg tggactgcct ccttggactt aaaaagagtt gagccaacat
2401 gcaaatcaaa aaacatttat gaactgattt cttagctttg gacttgacaa ctgacgaatg
2461 ctctgggggt gacctggccc ttgctgtccg ttccactccc atccttgatg atggagacac
2521 ctgtgtttat gttgtcactt cgcttgccat cctcatgccc cgggctctgc tggtttggag
2581 gggacagggc ccttggtttg cacacctcac ccgatcttgg ttataaggta cagtaaaagc
2641 gtctgaaaaa tgcattcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaa
//