LOCUS BC024746 2169 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens DEP domain containing 6, mRNA (cDNA clone MGC:29908 IMAGE:5112749), complete cds. ACCESSION BC024746 VERSION BC024746.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2169) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2169) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 42 Row: m Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 12232472. FEATURES Location/Qualifiers source 1..2169 /db_xref="H-InvDB:HIT000039834" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29908 IMAGE:5112749" /tissue_type="Cervix, carcinoma" /clone_lib="NIH_MGC_12" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2169 /gene="DEPDC6" /gene_synonym="DEP.6" /gene_synonym="DKFZp564B1778" /gene_synonym="FLJ12428" /gene_synonym="FLJ13854" /db_xref="GeneID:64798" /db_xref="HGNC:HGNC:22953" CDS 93..1322 /gene="DEPDC6" /gene_synonym="DEP.6" /gene_synonym="DKFZp564B1778" /gene_synonym="FLJ12428" /gene_synonym="FLJ13854" /codon_start=1 /product="DEP domain containing 6" /protein_id="AAH24746.1" /db_xref="GeneID:64798" /db_xref="HGNC:HGNC:22953" /translation="MEEGGSTGSAGSDSSTSGSGGAQQRELERMAEVLVTGEQLRLRL HEEKVIKDRRHHLKTYPNCFVAKELIDWLIEHKEASDRETAIKLMQKLADRGIIHHVC DEHKEFKDVKLFYRFRKDDGTFPLDNEVKAFMRGQRLYEKLMSPENTLLQPREEEGVK YERTFMASEFLDWLVQEGEATTRKEAEQLCHRLMEHGIIQHVSSKHPFVDSNLLYQFR MNFRRRRRLMELLNEKSPSSQETHDSPFCLRKQSHDNRKSTSFMSVSPSKEIKIVSAV RRSSMSSCGSSGYFSSSPTLSSSPPVLCNPKSVLKRPVTSEELLTPGAPYARKTFTIV GDAVGWGFVVRGSKPCHIQAVDPSGPAAAAGMKVCQFVVSVNGLNVLHVDYRTVSNLI LTGPRTIVMEVMEELEC" BASE COUNT 635 a 476 c 543 g 515 t ORIGIN 1 ggcgcgggaa gcgtctgtga gggcagactg atccgagcac ccaaaccctc ggcggacagc 61 ggagccagtg gtagccgcac ggccctaaaa ccatggagga gggcggcagc actggcagtg 121 ctggcagtga cagcagcacc agcgggagtg gcggggcgca gcaaagggag ctggagcgca 181 tggctgaggt cttggtcacc ggggaacagc tacggctcag gctgcatgaa gaaaaggtta 241 ttaaagatag acgtcatcat ctcaagacct acccaaactg ttttgtcgca aaagaactga 301 ttgactggct gattgaacac aaagaggctt ctgacagaga gacggcaatt aaactcatgc 361 agaaattagc agaccggggc attattcacc atgtgtgtga tgagcataag gaattcaagg 421 atgtcaaact cttctaccgc tttagaaagg atgacggcac cttcccattg gataatgaag 481 tgaaggcctt tatgagagga cagaggctat atgaaaagct gatgagccct gaaaacacac 541 tcctgcagcc cagggaggag gaaggggtca agtatgagcg caccttcatg gcatctgaat 601 tcctggactg gctggttcag gaaggtgagg ccaccacgag gaaagaggca gagcagcttt 661 gccaccggct tatggagcat ggcatcatcc agcatgtgtc cagcaagcac ccatttgtgg 721 acagcaatct tctctaccag ttcagaatga acttccggcg gaggcgaaga ctgatggagc 781 tgctcaatga aaagtccccc tcctcccagg aaactcatga cagtcccttc tgcctgagga 841 agcagagcca tgacaatcgg aaatctacca gctttatgtc agtgagcccc agcaaggaga 901 tcaagatcgt gtctgcagtg aggagaagca gcatgagcag ctgtggcagc agcggctact 961 tcagcagcag ccccaccctc agcagcagcc cccctgtgct ctgcaacccc aagtccgtgc 1021 tgaagagacc tgtcacctct gaggaactcc ttactcccgg ggctccgtat gcaaggaaga 1081 cattcacgat tgttggtgac gcggttggct ggggttttgt ggtgcgagga agtaagccat 1141 gccacatcca ggctgtagac cccagtggcc ctgcagccgc agcaggaatg aaggtctgtc 1201 agtttgtcgt ctctgtcaac gggctcaatg tcctgcatgt agactaccgg accgtgagca 1261 atctgattct gacgggccca cggacgattg tcatggaagt catggaggag ttagagtgct 1321 gagctcctgg gcctcccagc cctccagtgg cctgtgggtg agggaagcca gaatgacaca 1381 aagcaatgca aagacaagat tgccatgcaa atggatggtt ttggacatac gagtcttctc 1441 cgcacataca tgtctaaagt tgagttttat acactgaatg tggaagaacc gggtatcata 1501 tcttttttaa aaaatgtcag tgtagaaaac atttgggaaa ccattttcct acatgataga 1561 actgccttac tagatttcta tttgtagctc tcattcattg ttttttatct tagtttgcag 1621 aaaggtgttg aaatgcttct ctagcccaaa cagcgacatg ctaaagtccc cttcttcaga 1681 gtcaatagag tagttgttaa aggttttaaa ttgtactttc tccaaaatta gcatgcagct 1741 atttaatagg gaatctagat ttcaccaaga ttcaaatcag caacatttaa aggaataaga 1801 cctgtcacta gcattttcaa gggggttcta aagcattcaa gtgcttaaaa gccataaaaa 1861 atgacttctt aattcctgcc tttagtgtca acttttaagt taatacaggt ttcaattgtg 1921 gcattaggaa aaaaaaaaaa ccttgtgatg ctatggttgg gggtagttag ggagagacta 1981 catgaaattg tgtgccccta ttttctttct gatcctaaat cattttgttt tataaatcag 2041 ctatagcatc tttctagaat taatcctgaa tatgttgaat gttaaaatag agaagtttgt 2101 atatacacat aattaaaaat caacccttct ggcaagaaaa aaaaaaaaaa aaaaaaaaaa 2161 aaaaaaaaa //